Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 ZNF444P1-201ENST00000559497 298 ntBASIC19.32■□□□□ 0.68
UBA3Q8TBC4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBA3Q8TBC4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 ARMC10P1-201ENST00000313754 855 ntBASIC19.31■□□□□ 0.68
UBA3Q8TBC4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 AC024563.2-201ENST00000603282 481 ntBASIC19.31■□□□□ 0.68
UBA3Q8TBC4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
UBA3Q8TBC4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.3■□□□□ 0.68
UBA3Q8TBC4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 AC135050.7-201ENST00000624508 2218 ntBASIC19.29■□□□□ 0.68
UBA3Q8TBC4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 MIR662-201ENST00000384847 95 ntBASIC19.29■□□□□ 0.68
UBA3Q8TBC4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBA3Q8TBC4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms