Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 AC112497.1-201ENST00000624824 639 ntBASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 AC067852.2-201ENST00000590513 2313 ntBASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.38■■□□□ 1.01
SMARCC2Q8TAQ2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 LINC01126-201ENST00000623515 1646 ntBASIC21.37■■□□□ 1.01
SMARCC2Q8TAQ2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 AC005332.8-201ENST00000622750 2735 ntBASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 SLC25A6P5-201ENST00000435663 894 ntBASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 KRT18P38-201ENST00000449496 1282 ntBASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 MIR3180-4-201ENST00000582223 153 ntBASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 LETM1P2-201ENST00000597330 2178 ntBASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMARCC2Q8TAQ2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 FLJ13224-201ENST00000313737 1514 ntBASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMARCC2Q8TAQ2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms