Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNIP1Q8TAD8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 RPS2P1-201ENST00000434010 821 ntBASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 AC092910.1-201ENST00000482027 1129 ntBASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 RNA5SP415-201ENST00000517246 115 ntBASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNIP1Q8TAD8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 BCL2-203ENST00000589955 5011 ntBASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 RNA5SP416-201ENST00000516838 111 ntBASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 AC008687.5-201ENST00000593746 558 ntBASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNIP1Q8TAD8 INTS4P1-201ENST00000438455 1935 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 AP005117.1-201ENST00000584346 1413 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 AC113404.2-201ENST00000507884 177 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 OR7E14P-202ENST00000530490 1290 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 SART3-203ENST00000546611 1184 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 AC002347.1-201ENST00000569543 541 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 MIR3197-201ENST00000582241 73 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 TEX21P-204ENST00000641479 1693 ntBASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SNIP1Q8TAD8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms