Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDH19Q8TAB3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 FLJ13224-201ENST00000313737 1514 ntBASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 AP000997.3-201ENST00000623333 2250 ntBASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH19Q8TAB3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 AC067852.2-201ENST00000590513 2313 ntBASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH19Q8TAB3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 AL441883.1-201ENST00000566170 1045 ntBASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH19Q8TAB3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH19Q8TAB3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms