Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 ESPNP-201ENST00000270691 2015 ntBASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 LINC01238-205ENST00000567549 1107 ntBASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.42■□□□□ 0.38
SRFBP1Q8NEF9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 ABALON-201ENST00000629058 1903 ntBASIC17.41■□□□□ 0.38
SRFBP1Q8NEF9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 AC093677.2-201ENST00000600169 1863 ntBASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 FAM8A6P-201ENST00000407496 1135 ntBASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 AC092647.4-201ENST00000457211 535 ntBASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.4■□□□□ 0.38
SRFBP1Q8NEF9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SRFBP1Q8NEF9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SRFBP1Q8NEF9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.39■□□□□ 0.38
SRFBP1Q8NEF9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.39■□□□□ 0.38
SRFBP1Q8NEF9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SRFBP1Q8NEF9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFBP1Q8NEF9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms