Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC024563.2-201ENST00000603282 481 ntBASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 ZNF259P1-201ENST00000407656 1365 ntBASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 AL591684.3-201ENST00000605187 298 ntBASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
ZNF248Q8NDW4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 RCC2P3-201ENST00000418112 1537 ntBASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 AP005901.3-202ENST00000581653 237 ntBASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 OR6D1P-202ENST00000641007 5290 ntBASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
ZNF248Q8NDW4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 MIR940-201ENST00000401276 94 ntBASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 AC009065.1-201ENST00000564055 1225 ntBASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 AC008556.1-201ENST00000610908 2040 ntBASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF248Q8NDW4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF248Q8NDW4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms