Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CCDC168Q8NDH2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 MIR6752-201ENST00000618442 71 ntBASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 RN7SL204P-201ENST00000582831 262 ntBASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CCDC168Q8NDH2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 AC020907.5-201ENST00000624372 1936 ntBASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 SIGLEC30P-201ENST00000455569 941 ntBASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 MRPL20P1-201ENST00000400819 433 ntBASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 AL137060.1-201ENST00000618151 2648 ntBASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CCDC168Q8NDH2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 GPR89P-201ENST00000407924 1495 ntBASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 AL163051.1-201ENST00000569214 1512 ntBASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 GK-202ENST00000378941 458 ntTSL 3 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC168Q8NDH2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms