Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 AL354751.1-201ENST00000412768 1863 ntBASIC20.66■□□□□ 0.9
RETREG2Q8NC44 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETREG2Q8NC44 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 AC007613.1-201ENST00000572811 2597 ntBASIC20.65■□□□□ 0.9
RETREG2Q8NC44 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 LINC00265-3P-201ENST00000447588 903 ntBASIC20.65■□□□□ 0.9
RETREG2Q8NC44 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 AC091304.2-201ENST00000564639 760 ntBASIC20.65■□□□□ 0.9
RETREG2Q8NC44 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RETREG2Q8NC44 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RETREG2Q8NC44 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RETREG2Q8NC44 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RETREG2Q8NC44 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RETREG2Q8NC44 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RETREG2Q8NC44 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RETREG2Q8NC44 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 TSPY19P-201ENST00000418461 509 ntBASIC20.64■□□□□ 0.89
RETREG2Q8NC44 TSPY18P-201ENST00000441642 509 ntBASIC20.64■□□□□ 0.89
RETREG2Q8NC44 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 AC104390.1-201ENST00000555663 520 ntBASIC20.64■□□□□ 0.89
RETREG2Q8NC44 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RETREG2Q8NC44 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 DRAXINP1-201ENST00000437611 948 ntBASIC20.63■□□□□ 0.89
RETREG2Q8NC44 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETREG2Q8NC44 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms