Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 AC010331.1-201ENST00000611423 582 ntBASIC18.75■□□□□ 0.59
PAF1Q8N7H5 MYC-208ENST00000641036 567 ntBASIC18.75■□□□□ 0.59
PAF1Q8N7H5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
PAF1Q8N7H5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.74■□□□□ 0.59
PAF1Q8N7H5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 HOMER2P1-201ENST00000455653 964 ntBASIC18.74■□□□□ 0.59
PAF1Q8N7H5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 AL441883.1-201ENST00000566170 1045 ntBASIC18.74■□□□□ 0.59
PAF1Q8N7H5 AC087388.1-201ENST00000571370 1112 ntBASIC18.74■□□□□ 0.59
PAF1Q8N7H5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PAF1Q8N7H5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 AC022616.7-201ENST00000525383 220 ntBASIC18.73■□□□□ 0.59
PAF1Q8N7H5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 AC009065.1-201ENST00000564055 1225 ntBASIC18.73■□□□□ 0.59
PAF1Q8N7H5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 KRT8P7-201ENST00000533003 1432 ntBASIC18.73■□□□□ 0.59
PAF1Q8N7H5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.73■□□□□ 0.59
PAF1Q8N7H5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 ANO7L1-203ENST00000602586 1720 ntBASIC18.72■□□□□ 0.59
PAF1Q8N7H5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.72■□□□□ 0.59
PAF1Q8N7H5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 BX323043.1-201ENST00000641006 1765 ntBASIC18.72■□□□□ 0.59
PAF1Q8N7H5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PAF1Q8N7H5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms