Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
LINC01561Q8N1V8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 RNA5SP413-201ENST00000516373 109 ntBASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 MIR3180-4-201ENST00000582223 153 ntBASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 AC012317.2-201ENST00000623305 2251 ntBASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01561Q8N1V8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 AC011506.1-201ENST00000474329 610 ntBASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.26□□□□□ -0.45
LINC01561Q8N1V8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 SDHAP2-201ENST00000455183 2001 ntBASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01561Q8N1V8 DUTP2-201ENST00000519164 463 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms