Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KRT78Q8N1N4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 TERF1P1-201ENST00000311003 1181 ntBASIC17.63■□□□□ 0.41
KRT78Q8N1N4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.63■□□□□ 0.41
KRT78Q8N1N4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 BX664615.1-201ENST00000443558 458 ntBASIC17.63■□□□□ 0.41
KRT78Q8N1N4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.63■□□□□ 0.41
KRT78Q8N1N4 ESPNP-201ENST00000270691 2015 ntBASIC17.62■□□□□ 0.41
KRT78Q8N1N4 AC135776.1-201ENST00000319817 2481 ntBASIC17.62■□□□□ 0.41
KRT78Q8N1N4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 AL023973.1-201ENST00000624619 620 ntBASIC17.62■□□□□ 0.41
KRT78Q8N1N4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 AL354751.1-201ENST00000412768 1863 ntBASIC17.62■□□□□ 0.41
KRT78Q8N1N4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 AL390961.4-201ENST00000623958 2535 ntBASIC17.62■□□□□ 0.41
KRT78Q8N1N4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.62■□□□□ 0.41
KRT78Q8N1N4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 AC093677.2-201ENST00000600169 1863 ntBASIC17.61■□□□□ 0.41
KRT78Q8N1N4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 AC005521.1-201ENST00000393351 872 ntBASIC17.61■□□□□ 0.41
KRT78Q8N1N4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 GCSHP2-201ENST00000560971 527 ntBASIC17.61■□□□□ 0.41
KRT78Q8N1N4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT78Q8N1N4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 AC099343.3-201ENST00000605834 2503 ntBASIC17.6■□□□□ 0.41
KRT78Q8N1N4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 AC008687.5-201ENST00000593746 558 ntBASIC17.6■□□□□ 0.41
KRT78Q8N1N4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KRT78Q8N1N4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms