Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 MIR149-201ENST00000384879 89 ntBASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 AC068472.1-201ENST00000474589 881 ntBASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 AC113404.2-201ENST00000507884 177 ntBASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 AP001269.4-201ENST00000609611 512 ntBASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEFF1Q8IYR6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.08■□□□□ 0.49
TMEFF1Q8IYR6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TMEFF1Q8IYR6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TMEFF1Q8IYR6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEFF1Q8IYR6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TMEFF1Q8IYR6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEFF1Q8IYR6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TMEFF1Q8IYR6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 RPS2P28-201ENST00000314255 741 ntBASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 RBM17P3-201ENST00000417687 1192 ntBASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 AC092183.1-201ENST00000469884 875 ntBASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TMEFF1Q8IYR6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 AC009102.3-201ENST00000623118 1491 ntBASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 AC008687.5-201ENST00000593746 558 ntBASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.07■□□□□ 0.48
TMEFF1Q8IYR6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms