Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.58■■□□□ 1.21
SMC5Q8IY18 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.58■■□□□ 1.21
SMC5Q8IY18 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.58■■□□□ 1.21
SMC5Q8IY18 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.58■■□□□ 1.21
SMC5Q8IY18 AC145285.6-201ENST00000604632 637 ntBASIC22.58■■□□□ 1.21
SMC5Q8IY18 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.58■■□□□ 1.21
SMC5Q8IY18 AC066615.1-201ENST00000640911 628 ntBASIC22.58■■□□□ 1.21
SMC5Q8IY18 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
SMC5Q8IY18 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMC5Q8IY18 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
SMC5Q8IY18 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SMC5Q8IY18 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SMC5Q8IY18 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC22.58■■□□□ 1.2
SMC5Q8IY18 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SMC5Q8IY18 LTB4R2-202ENST00000528054 3092 ntBASIC22.58■■□□□ 1.2
SMC5Q8IY18 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SMC5Q8IY18 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
SMC5Q8IY18 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 PVRIG2P-201ENST00000435460 978 ntBASIC22.57■■□□□ 1.2
SMC5Q8IY18 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 AL157888.1-201ENST00000631930 593 ntBASIC22.57■■□□□ 1.2
SMC5Q8IY18 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMC5Q8IY18 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.57■■□□□ 1.2
SMC5Q8IY18 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 AC087499.1-201ENST00000418141 1075 ntBASIC22.56■■□□□ 1.2
SMC5Q8IY18 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 AC092865.7-201ENST00000641832 219 ntBASIC22.56■■□□□ 1.2
SMC5Q8IY18 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SMC5Q8IY18 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC5Q8IY18 KRT18P22-201ENST00000402024 1347 ntBASIC22.56■■□□□ 1.2
SMC5Q8IY18 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC5Q8IY18 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC5Q8IY18 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC5Q8IY18 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC5Q8IY18 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 AC141257.4-201ENST00000634557 245 ntBASIC22.55■■□□□ 1.2
SMC5Q8IY18 AC136944.6-201ENST00000634818 245 ntBASIC22.55■■□□□ 1.2
SMC5Q8IY18 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC5Q8IY18 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC5Q8IY18 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms