Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 HTR5BP-201ENST00000430851 1154 ntBASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RP1L1Q8IWN7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 AC004832.2-201ENST00000426397 482 ntBASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 SART3-203ENST00000546611 1184 ntBASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 RBM17P3-201ENST00000417687 1192 ntBASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 AL356488.2-201ENST00000602755 427 ntBASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RP1L1Q8IWN7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 AP003733.1-201ENST00000491725 852 ntBASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.5■□□□□ 0.23
RP1L1Q8IWN7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RP1L1Q8IWN7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms