Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.63■■□□□ 1.05
CTR9Q6PD62 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.63■■□□□ 1.05
CTR9Q6PD62 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.63■■□□□ 1.05
CTR9Q6PD62 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.63■■□□□ 1.05
CTR9Q6PD62 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.63■■□□□ 1.05
CTR9Q6PD62 AL592071.1-201ENST00000611956 408 ntBASIC21.63■■□□□ 1.05
CTR9Q6PD62 AC012313.10-201ENST00000623509 926 ntBASIC21.63■■□□□ 1.05
CTR9Q6PD62 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTR9Q6PD62 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTR9Q6PD62 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.63■■□□□ 1.05
CTR9Q6PD62 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTR9Q6PD62 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTR9Q6PD62 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CTR9Q6PD62 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.62■■□□□ 1.05
CTR9Q6PD62 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.62■■□□□ 1.05
CTR9Q6PD62 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 AC008687.5-201ENST00000593746 558 ntBASIC21.62■■□□□ 1.05
CTR9Q6PD62 AC124864.1-201ENST00000623408 392 ntBASIC21.62■■□□□ 1.05
CTR9Q6PD62 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTR9Q6PD62 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CTR9Q6PD62 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 AC138932.1-201ENST00000534164 6830 ntBASIC21.61■■□□□ 1.05
CTR9Q6PD62 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 GUSBP12-201ENST00000513727 720 ntBASIC21.61■■□□□ 1.05
CTR9Q6PD62 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.61■■□□□ 1.05
CTR9Q6PD62 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 ESPNP-201ENST00000270691 2015 ntBASIC21.61■■□□□ 1.05
CTR9Q6PD62 AC004408.2-201ENST00000623613 2777 ntBASIC21.61■■□□□ 1.05
CTR9Q6PD62 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.61■■□□□ 1.05
CTR9Q6PD62 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTR9Q6PD62 GMCL1P1-201ENST00000463439 1581 ntBASIC21.61■■□□□ 1.05
CTR9Q6PD62 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 AC120498.9-201ENST00000339021 3867 ntBASIC21.6■■□□□ 1.05
CTR9Q6PD62 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 AL845331.1-201ENST00000424978 1190 ntBASIC21.6■■□□□ 1.05
CTR9Q6PD62 LINC00265-3P-201ENST00000447588 903 ntBASIC21.6■■□□□ 1.05
CTR9Q6PD62 TOB2P1-201ENST00000469761 992 ntBASIC21.6■■□□□ 1.05
CTR9Q6PD62 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CTR9Q6PD62 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.6■■□□□ 1.05
CTR9Q6PD62 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTR9Q6PD62 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTR9Q6PD62 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTR9Q6PD62 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CTR9Q6PD62 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTR9Q6PD62 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CTR9Q6PD62 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.59■■□□□ 1.05
CTR9Q6PD62 AL138781.2-201ENST00000617896 1843 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms