Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 LINC00896-202ENST00000609602 2128 ntBASIC16.64■□□□□ 0.25
NIPAL3Q6P499 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 KRT18P22-201ENST00000402024 1347 ntBASIC16.64■□□□□ 0.25
NIPAL3Q6P499 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.64■□□□□ 0.25
NIPAL3Q6P499 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 AL109659.2-201ENST00000606809 1674 ntBASIC16.63■□□□□ 0.25
NIPAL3Q6P499 REXO1L9P-201ENST00000604264 2108 ntBASIC16.63■□□□□ 0.25
NIPAL3Q6P499 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NIPAL3Q6P499 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.62■□□□□ 0.25
NIPAL3Q6P499 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 AC145285.6-201ENST00000604632 637 ntBASIC16.62■□□□□ 0.25
NIPAL3Q6P499 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NIPAL3Q6P499 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 KRT18P41-201ENST00000518924 1277 ntBASIC16.61■□□□□ 0.25
NIPAL3Q6P499 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NIPAL3Q6P499 HTR7P1-202ENST00000624664 4411 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms