Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 KRT19P1-201ENST00000405746 1186 ntBASIC13.81□□□□□ -0.2
MRPL54Q6P161 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 AC007322.4-201ENST00000509611 723 ntBASIC13.81□□□□□ -0.2
MRPL54Q6P161 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 AL121761.2-201ENST00000598007 1648 ntBASIC13.81□□□□□ -0.2
MRPL54Q6P161 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.81□□□□□ -0.2
MRPL54Q6P161 AC112777.1-201ENST00000540175 1423 ntBASIC13.81□□□□□ -0.2
MRPL54Q6P161 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MRPL54Q6P161 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 TSPY21P-201ENST00000433481 731 ntBASIC13.8□□□□□ -0.2
MRPL54Q6P161 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 AL589743.5-201ENST00000616611 1050 ntBASIC13.8□□□□□ -0.2
MRPL54Q6P161 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MRPL54Q6P161 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.8□□□□□ -0.2
MRPL54Q6P161 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
MRPL54Q6P161 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms