Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 REXO1L3P-201ENST00000622202 1288 ntBASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 AC079776.2-201ENST00000641154 1609 ntBASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPF38BQ5VTL8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 PIN1P1-201ENST00000412108 996 ntBASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 SLC25A39P2-201ENST00000537614 270 ntBASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF38BQ5VTL8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 IGLL3P-201ENST00000412472 434 ntBASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 MIR4525-201ENST00000580000 75 ntBASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPF38BQ5VTL8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 AC006333.2-201ENST00000607957 2099 ntBASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 KLF2P3-201ENST00000451977 1087 ntBASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 AC096734.2-201ENST00000562054 433 ntBASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 AC010507.1-201ENST00000633895 436 ntBASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.66■□□□□ 0.74
PRPF38BQ5VTL8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms