Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 PMPCAP1-201ENST00000508114 1576 ntBASIC22.9■■□□□ 1.26
RC3H1Q5TC82 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 PRYP5-201ENST00000451909 266 ntBASIC22.9■■□□□ 1.26
RC3H1Q5TC82 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 AL022326.1-202ENST00000641533 845 ntBASIC22.9■■□□□ 1.26
RC3H1Q5TC82 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RC3H1Q5TC82 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RC3H1Q5TC82 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
RC3H1Q5TC82 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RC3H1Q5TC82 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
RC3H1Q5TC82 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
RC3H1Q5TC82 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
RC3H1Q5TC82 AC007967.3-201ENST00000434308 558 ntBASIC22.89■■□□□ 1.25
RC3H1Q5TC82 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.89■■□□□ 1.25
RC3H1Q5TC82 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.89■■□□□ 1.25
RC3H1Q5TC82 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
RC3H1Q5TC82 PGM5P2-202ENST00000637225 1043 ntBASIC22.89■■□□□ 1.25
RC3H1Q5TC82 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RC3H1Q5TC82 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.89■■□□□ 1.25
RC3H1Q5TC82 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RC3H1Q5TC82 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.89■■□□□ 1.25
RC3H1Q5TC82 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 AC073621.1-201ENST00000392730 636 ntBASIC22.88■■□□□ 1.25
RC3H1Q5TC82 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 LINC02084-201ENST00000606069 1096 ntBASIC22.88■■□□□ 1.25
RC3H1Q5TC82 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RC3H1Q5TC82 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 AC022898.2-201ENST00000616822 1312 ntBASIC22.87■■□□□ 1.25
RC3H1Q5TC82 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 AC023274.1-201ENST00000418278 595 ntBASIC22.87■■□□□ 1.25
RC3H1Q5TC82 DNAJB3-202ENST00000449667 1266 ntBASIC22.87■■□□□ 1.25
RC3H1Q5TC82 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.87■■□□□ 1.25
RC3H1Q5TC82 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 AP006288.1-201ENST00000446065 395 ntBASIC22.86■■□□□ 1.25
RC3H1Q5TC82 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
RC3H1Q5TC82 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms