Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17■□□□□ 0.31
RFX4Q33E94 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17■□□□□ 0.31
RFX4Q33E94 AC006116.8-202ENST00000587620 1550 ntBASIC17■□□□□ 0.31
RFX4Q33E94 AL445675.2-201ENST00000620291 557 ntBASIC17■□□□□ 0.31
RFX4Q33E94 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17■□□□□ 0.31
RFX4Q33E94 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX4Q33E94 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX4Q33E94 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX4Q33E94 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFX4Q33E94 AL096828.2-201ENST00000567259 1965 ntBASIC17■□□□□ 0.31
RFX4Q33E94 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX4Q33E94 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX4Q33E94 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RFX4Q33E94 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17■□□□□ 0.31
RFX4Q33E94 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RFX4Q33E94 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX4Q33E94 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17■□□□□ 0.31
RFX4Q33E94 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
RFX4Q33E94 AL023806.1-201ENST00000603994 1649 ntBASIC16.99■□□□□ 0.31
RFX4Q33E94 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RFX4Q33E94 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFX4Q33E94 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RFX4Q33E94 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RFX4Q33E94 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RFX4Q33E94 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 KRT8P11-201ENST00000409686 1436 ntBASIC16.99■□□□□ 0.31
RFX4Q33E94 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RFX4Q33E94 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFX4Q33E94 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RFX4Q33E94 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX4Q33E94 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.99■□□□□ 0.31
RFX4Q33E94 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX4Q33E94 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RFX4Q33E94 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX4Q33E94 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
RFX4Q33E94 AC131212.4-201ENST00000623606 975 ntBASIC16.99■□□□□ 0.31
RFX4Q33E94 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RFX4Q33E94 AC080080.1-201ENST00000625121 2420 ntBASIC16.99■□□□□ 0.31
RFX4Q33E94 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX4Q33E94 AC084018.2-201ENST00000613093 2607 ntBASIC16.99■□□□□ 0.31
RFX4Q33E94 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 HTR7P1-201ENST00000538670 1336 ntBASIC16.98■□□□□ 0.31
RFX4Q33E94 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.98■□□□□ 0.31
RFX4Q33E94 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.98■□□□□ 0.31
RFX4Q33E94 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFX4Q33E94 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
RFX4Q33E94 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX4Q33E94 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX4Q33E94 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RFX4Q33E94 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RFX4Q33E94 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFX4Q33E94 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX4Q33E94 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RFX4Q33E94 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms