Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.99■□□□□ 0.47
SRP54P61011 AL499627.1-201ENST00000569373 2188 ntBASIC17.99■□□□□ 0.47
SRP54P61011 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.99■□□□□ 0.47
SRP54P61011 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.99■□□□□ 0.47
SRP54P61011 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SRP54P61011 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.99■□□□□ 0.47
SRP54P61011 AC008687.5-201ENST00000593746 558 ntBASIC17.99■□□□□ 0.47
SRP54P61011 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 AL592071.1-201ENST00000611956 408 ntBASIC17.99■□□□□ 0.47
SRP54P61011 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.99■□□□□ 0.47
SRP54P61011 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.99■□□□□ 0.47
SRP54P61011 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SRP54P61011 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.99■□□□□ 0.47
SRP54P61011 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.99■□□□□ 0.47
SRP54P61011 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRP54P61011 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
SRP54P61011 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
SRP54P61011 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 SDHAP2-201ENST00000455183 2001 ntBASIC17.98■□□□□ 0.47
SRP54P61011 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.98■□□□□ 0.47
SRP54P61011 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SRP54P61011 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.98■□□□□ 0.47
SRP54P61011 AC012615.1-201ENST00000565797 1299 ntBASIC17.98■□□□□ 0.47
SRP54P61011 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.98■□□□□ 0.47
SRP54P61011 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.98■□□□□ 0.47
SRP54P61011 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 AC004263.2-201ENST00000617183 678 ntBASIC17.98■□□□□ 0.47
SRP54P61011 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.98■□□□□ 0.47
SRP54P61011 AC120498.9-201ENST00000339021 3867 ntBASIC17.98■□□□□ 0.47
SRP54P61011 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.98■□□□□ 0.47
SRP54P61011 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SRP54P61011 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.98■□□□□ 0.47
SRP54P61011 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRP54P61011 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.98■□□□□ 0.47
SRP54P61011 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SRP54P61011 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.97■□□□□ 0.47
SRP54P61011 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.97■□□□□ 0.47
SRP54P61011 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
SRP54P61011 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 RN7SL606P-201ENST00000472779 293 ntBASIC17.97■□□□□ 0.47
SRP54P61011 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.97■□□□□ 0.47
SRP54P61011 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.97■□□□□ 0.47
SRP54P61011 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.97■□□□□ 0.47
SRP54P61011 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRP54P61011 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SRP54P61011 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SRP54P61011 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.96■□□□□ 0.47
SRP54P61011 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 AC233702.3-201ENST00000578656 1387 ntBASIC17.96■□□□□ 0.47
SRP54P61011 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.96■□□□□ 0.47
SRP54P61011 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 AC104819.1-201ENST00000504587 486 ntBASIC17.96■□□□□ 0.47
SRP54P61011 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.96■□□□□ 0.47
SRP54P61011 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SRP54P61011 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms