Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SPCS3P61009 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SPCS3P61009 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SPCS3P61009 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.88□□□□□ -0.03
SPCS3P61009 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.88□□□□□ -0.03
SPCS3P61009 AC004951.3-201ENST00000418645 1148 ntBASIC14.88□□□□□ -0.03
SPCS3P61009 AC091390.4-202ENST00000476426 537 ntBASIC14.88□□□□□ -0.03
SPCS3P61009 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SPCS3P61009 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.88□□□□□ -0.03
SPCS3P61009 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.88□□□□□ -0.03
SPCS3P61009 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.88□□□□□ -0.03
SPCS3P61009 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.88□□□□□ -0.03
SPCS3P61009 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SPCS3P61009 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.88□□□□□ -0.03
SPCS3P61009 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 AC103702.1-201ENST00000548801 2630 ntBASIC14.88□□□□□ -0.03
SPCS3P61009 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 AC134043.2-201ENST00000624206 2238 ntBASIC14.88□□□□□ -0.03
SPCS3P61009 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPCS3P61009 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.88□□□□□ -0.03
SPCS3P61009 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SPCS3P61009 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SPCS3P61009 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SPCS3P61009 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.87□□□□□ -0.03
SPCS3P61009 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
SPCS3P61009 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.87□□□□□ -0.03
SPCS3P61009 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 NFIC-211ENST00000641145 8399 ntBASIC14.87□□□□□ -0.03
SPCS3P61009 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.87□□□□□ -0.03
SPCS3P61009 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPCS3P61009 FLJ13224-201ENST00000313737 1514 ntBASIC14.87□□□□□ -0.03
SPCS3P61009 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.86□□□□□ -0.03
SPCS3P61009 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.86□□□□□ -0.03
SPCS3P61009 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SPCS3P61009 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPCS3P61009 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SPCS3P61009 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.86□□□□□ -0.03
SPCS3P61009 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPCS3P61009 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SPCS3P61009 REXO1L9P-201ENST00000604264 2108 ntBASIC14.86□□□□□ -0.03
SPCS3P61009 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPCS3P61009 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SPCS3P61009 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPCS3P61009 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SPCS3P61009 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPCS3P61009 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SPCS3P61009 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.86□□□□□ -0.03
SPCS3P61009 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms