Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PER3P56645 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.88■□□□□ 0.29
PER3P56645 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PER3P56645 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.88■□□□□ 0.29
PER3P56645 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.88■□□□□ 0.29
PER3P56645 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.88■□□□□ 0.29
PER3P56645 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.88■□□□□ 0.29
PER3P56645 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.88■□□□□ 0.29
PER3P56645 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.88■□□□□ 0.29
PER3P56645 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
PER3P56645 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.88■□□□□ 0.29
PER3P56645 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.88■□□□□ 0.29
PER3P56645 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PER3P56645 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PER3P56645 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PER3P56645 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PER3P56645 AC106820.2-201ENST00000563775 3264 ntBASIC16.87■□□□□ 0.29
PER3P56645 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.87■□□□□ 0.29
PER3P56645 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PER3P56645 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PER3P56645 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 SPDYE13P-201ENST00000445314 798 ntBASIC16.87■□□□□ 0.29
PER3P56645 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.87■□□□□ 0.29
PER3P56645 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PER3P56645 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PER3P56645 AL121772.3-201ENST00000610840 674 ntBASIC16.87■□□□□ 0.29
PER3P56645 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PER3P56645 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.87■□□□□ 0.29
PER3P56645 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.87■□□□□ 0.29
PER3P56645 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.87■□□□□ 0.29
PER3P56645 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PER3P56645 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.87■□□□□ 0.29
PER3P56645 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PER3P56645 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.86■□□□□ 0.29
PER3P56645 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.86■□□□□ 0.29
PER3P56645 AC104581.1-202ENST00000635932 2618 ntBASIC16.86■□□□□ 0.29
PER3P56645 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PER3P56645 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PER3P56645 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.86■□□□□ 0.29
PER3P56645 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.86■□□□□ 0.29
PER3P56645 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PER3P56645 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.86■□□□□ 0.29
PER3P56645 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PER3P56645 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 KRT8P26-201ENST00000534154 1276 ntBASIC16.86■□□□□ 0.29
PER3P56645 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.86■□□□□ 0.29
PER3P56645 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.86■□□□□ 0.29
PER3P56645 IFNL4P1-201ENST00000607083 540 ntBASIC16.86■□□□□ 0.29
PER3P56645 AC023511.2-201ENST00000618803 211 ntBASIC16.86■□□□□ 0.29
PER3P56645 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.86■□□□□ 0.29
PER3P56645 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PER3P56645 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PER3P56645 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PER3P56645 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PER3P56645 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms