Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.14■□□□□ 0.49
NUBP1P53384 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NUBP1P53384 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NUBP1P53384 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUBP1P53384 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.13■□□□□ 0.49
NUBP1P53384 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.13■□□□□ 0.49
NUBP1P53384 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.13■□□□□ 0.49
NUBP1P53384 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.13■□□□□ 0.49
NUBP1P53384 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.13■□□□□ 0.49
NUBP1P53384 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC18.13■□□□□ 0.49
NUBP1P53384 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.13■□□□□ 0.49
NUBP1P53384 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.13■□□□□ 0.49
NUBP1P53384 AC004449.1-201ENST00000564240 433 ntBASIC18.13■□□□□ 0.49
NUBP1P53384 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.13■□□□□ 0.49
NUBP1P53384 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.13■□□□□ 0.49
NUBP1P53384 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.13■□□□□ 0.49
NUBP1P53384 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.13■□□□□ 0.49
NUBP1P53384 AC092865.6-201ENST00000642101 219 ntBASIC18.13■□□□□ 0.49
NUBP1P53384 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NUBP1P53384 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.13■□□□□ 0.49
NUBP1P53384 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUBP1P53384 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.12■□□□□ 0.49
NUBP1P53384 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
NUBP1P53384 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.12■□□□□ 0.49
NUBP1P53384 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NUBP1P53384 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NUBP1P53384 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.12■□□□□ 0.49
NUBP1P53384 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.12■□□□□ 0.49
NUBP1P53384 KRT18P41-201ENST00000518924 1277 ntBASIC18.12■□□□□ 0.49
NUBP1P53384 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC18.12■□□□□ 0.49
NUBP1P53384 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NUBP1P53384 AJ011932.1-201ENST00000621707 465 ntBASIC18.12■□□□□ 0.49
NUBP1P53384 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 LINC00565-201ENST00000562710 2331 ntBASIC18.12■□□□□ 0.49
NUBP1P53384 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.12■□□□□ 0.49
NUBP1P53384 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.12■□□□□ 0.49
NUBP1P53384 AL163051.1-201ENST00000569214 1512 ntBASIC18.12■□□□□ 0.49
NUBP1P53384 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.12■□□□□ 0.49
NUBP1P53384 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.12■□□□□ 0.49
NUBP1P53384 AC079776.2-201ENST00000641154 1609 ntBASIC18.12■□□□□ 0.49
NUBP1P53384 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NUBP1P53384 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.12■□□□□ 0.49
NUBP1P53384 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUBP1P53384 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NUBP1P53384 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.11■□□□□ 0.49
NUBP1P53384 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
NUBP1P53384 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.11■□□□□ 0.49
NUBP1P53384 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.11■□□□□ 0.49
NUBP1P53384 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.11■□□□□ 0.49
NUBP1P53384 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.11■□□□□ 0.49
NUBP1P53384 AC079414.2-201ENST00000567157 1104 ntBASIC18.11■□□□□ 0.49
NUBP1P53384 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.11■□□□□ 0.49
NUBP1P53384 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.11■□□□□ 0.49
NUBP1P53384 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NUBP1P53384 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.11■□□□□ 0.49
NUBP1P53384 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.11■□□□□ 0.49
NUBP1P53384 AC093512.1-201ENST00000617969 520 ntBASIC18.11■□□□□ 0.49
NUBP1P53384 AC073592.4-201ENST00000623827 446 ntBASIC18.11■□□□□ 0.49
NUBP1P53384 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 KRT8P50-201ENST00000562022 1438 ntBASIC18.11■□□□□ 0.49
NUBP1P53384 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 AC020907.5-201ENST00000624372 1936 ntBASIC18.11■□□□□ 0.49
NUBP1P53384 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUBP1P53384 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUBP1P53384 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.1■□□□□ 0.49
NUBP1P53384 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUBP1P53384 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUBP1P53384 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.1■□□□□ 0.49
NUBP1P53384 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUBP1P53384 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUBP1P53384 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms