Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
LBX1P52954 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.51■□□□□ 0.87
LBX1P52954 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.51■□□□□ 0.87
LBX1P52954 SLC25A39P2-201ENST00000537614 270 ntBASIC20.51■□□□□ 0.87
LBX1P52954 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.51■□□□□ 0.87
LBX1P52954 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.51■□□□□ 0.87
LBX1P52954 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.51■□□□□ 0.87
LBX1P52954 AC010654.1-201ENST00000615722 808 ntBASIC20.51■□□□□ 0.87
LBX1P52954 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.51■□□□□ 0.87
LBX1P52954 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LBX1P52954 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LBX1P52954 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LBX1P52954 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LBX1P52954 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.5■□□□□ 0.87
LBX1P52954 AL627223.1-201ENST00000416693 442 ntBASIC20.5■□□□□ 0.87
LBX1P52954 RHOQP3-201ENST00000437982 621 ntBASIC20.5■□□□□ 0.87
LBX1P52954 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LBX1P52954 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.5■□□□□ 0.87
LBX1P52954 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.5■□□□□ 0.87
LBX1P52954 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LBX1P52954 AL662799.1-202ENST00000614205 422 ntBASIC20.5■□□□□ 0.87
LBX1P52954 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LBX1P52954 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LBX1P52954 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LBX1P52954 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LBX1P52954 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LBX1P52954 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.5■□□□□ 0.87
LBX1P52954 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.5■□□□□ 0.87
LBX1P52954 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LBX1P52954 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
LBX1P52954 LINC01126-201ENST00000623515 1646 ntBASIC20.49■□□□□ 0.87
LBX1P52954 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.49■□□□□ 0.87
LBX1P52954 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LBX1P52954 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.49■□□□□ 0.87
LBX1P52954 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LBX1P52954 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.49■□□□□ 0.87
LBX1P52954 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LBX1P52954 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LBX1P52954 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.49■□□□□ 0.87
LBX1P52954 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.49■□□□□ 0.87
LBX1P52954 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
LBX1P52954 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.49■□□□□ 0.87
LBX1P52954 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.49■□□□□ 0.87
LBX1P52954 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LBX1P52954 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.49■□□□□ 0.87
LBX1P52954 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.49■□□□□ 0.87
LBX1P52954 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.49■□□□□ 0.87
LBX1P52954 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.49■□□□□ 0.87
LBX1P52954 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LBX1P52954 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.49■□□□□ 0.87
LBX1P52954 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LBX1P52954 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
LBX1P52954 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LBX1P52954 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LBX1P52954 Z98044.1-201ENST00000632503 1764 ntBASIC20.49■□□□□ 0.87
LBX1P52954 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LBX1P52954 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.48■□□□□ 0.87
LBX1P52954 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LBX1P52954 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LBX1P52954 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
LBX1P52954 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.48■□□□□ 0.87
LBX1P52954 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.48■□□□□ 0.87
LBX1P52954 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.48■□□□□ 0.87
LBX1P52954 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LBX1P52954 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LBX1P52954 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LBX1P52954 TUBB3P1-201ENST00000405796 1332 ntBASIC20.48■□□□□ 0.87
LBX1P52954 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LBX1P52954 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 SIGLEC16-201ENST00000599858 1437 ntBASIC20.47■□□□□ 0.87
LBX1P52954 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.47■□□□□ 0.87
LBX1P52954 U91328.1-201ENST00000437528 223 ntBASIC20.47■□□□□ 0.87
LBX1P52954 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.47■□□□□ 0.87
LBX1P52954 KRT17P7-201ENST00000451704 1104 ntBASIC20.47■□□□□ 0.87
LBX1P52954 AC007064.4-201ENST00000637740 555 ntBASIC20.47■□□□□ 0.87
LBX1P52954 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LBX1P52954 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.47■□□□□ 0.87
LBX1P52954 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LBX1P52954 KRT8P47-201ENST00000604727 1398 ntBASIC20.46■□□□□ 0.87
LBX1P52954 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LBX1P52954 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.46■□□□□ 0.87
LBX1P52954 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LBX1P52954 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.46■□□□□ 0.87
LBX1P52954 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LBX1P52954 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LBX1P52954 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LBX1P52954 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms