Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.29■□□□□ 0.2
GBX2P52951 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.29■□□□□ 0.2
GBX2P52951 AC004951.3-201ENST00000418645 1148 ntBASIC16.29■□□□□ 0.2
GBX2P52951 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.29■□□□□ 0.2
GBX2P52951 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.29■□□□□ 0.2
GBX2P52951 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
GBX2P52951 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.29■□□□□ 0.2
GBX2P52951 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.29■□□□□ 0.2
GBX2P52951 AL023875.1-201ENST00000640777 796 ntBASIC16.29■□□□□ 0.2
GBX2P52951 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 AL109659.2-201ENST00000606809 1674 ntBASIC16.29■□□□□ 0.2
GBX2P52951 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.29■□□□□ 0.2
GBX2P52951 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GBX2P52951 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.29■□□□□ 0.2
GBX2P52951 AL096828.2-201ENST00000567259 1965 ntBASIC16.29■□□□□ 0.2
GBX2P52951 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.29■□□□□ 0.2
GBX2P52951 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.29■□□□□ 0.2
GBX2P52951 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GBX2P52951 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.28■□□□□ 0.2
GBX2P52951 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.28■□□□□ 0.2
GBX2P52951 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.28■□□□□ 0.2
GBX2P52951 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.28■□□□□ 0.2
GBX2P52951 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.28■□□□□ 0.2
GBX2P52951 AL356309.3-201ENST00000624132 1934 ntBASIC16.28■□□□□ 0.2
GBX2P52951 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.28■□□□□ 0.2
GBX2P52951 NIFKP9-201ENST00000419265 221 ntBASIC16.28■□□□□ 0.2
GBX2P52951 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GBX2P52951 AP003097.1-201ENST00000530657 1135 ntBASIC16.28■□□□□ 0.2
GBX2P52951 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GBX2P52951 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GBX2P52951 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GBX2P52951 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.28■□□□□ 0.2
GBX2P52951 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GBX2P52951 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.28■□□□□ 0.2
GBX2P52951 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.28■□□□□ 0.2
GBX2P52951 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
GBX2P52951 AC012317.2-201ENST00000623305 2251 ntBASIC16.28■□□□□ 0.2
GBX2P52951 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.27■□□□□ 0.2
GBX2P52951 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.27■□□□□ 0.2
GBX2P52951 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
GBX2P52951 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GBX2P52951 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GBX2P52951 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.27■□□□□ 0.2
GBX2P52951 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GBX2P52951 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.27■□□□□ 0.2
GBX2P52951 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.27■□□□□ 0.2
GBX2P52951 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GBX2P52951 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.27■□□□□ 0.2
GBX2P52951 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.27■□□□□ 0.2
GBX2P52951 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.27■□□□□ 0.2
GBX2P52951 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GBX2P52951 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GBX2P52951 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
GBX2P52951 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GBX2P52951 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GBX2P52951 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.27■□□□□ 0.19
GBX2P52951 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
GBX2P52951 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GBX2P52951 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GBX2P52951 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GBX2P52951 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GBX2P52951 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GBX2P52951 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GBX2P52951 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GBX2P52951 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms