Protein–RNA interactions for Protein: P48681

NES, Nestin, humanhuman

Predictions only

Length 1,621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NESP48681 AC087641.1-201ENST00000557561 1021 ntBASIC31.27■■■□□ 2.6
NESP48681 AC091812.2-201ENST00000619081 385 ntBASIC31.27■■■□□ 2.6
NESP48681 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC31.27■■■□□ 2.6
NESP48681 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC31.27■■■□□ 2.6
NESP48681 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NESP48681 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC31.27■■■□□ 2.6
NESP48681 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
NESP48681 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC31.27■■■□□ 2.6
NESP48681 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.27■■■□□ 2.6
NESP48681 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC31.27■■■□□ 2.6
NESP48681 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NESP48681 IGHV3-65-201ENST00000523210 341 ntBASIC31.27■■■□□ 2.6
NESP48681 AQP6-203ENST00000551733 849 ntTSL 3 BASIC31.27■■■□□ 2.6
NESP48681 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
NESP48681 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC31.27■■■□□ 2.6
NESP48681 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC31.27■■■□□ 2.6
NESP48681 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC31.27■■■□□ 2.6
NESP48681 AD001527.2-201ENST00000622994 785 ntBASIC31.27■■■□□ 2.6
NESP48681 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NESP48681 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
NESP48681 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
NESP48681 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.6
NESP48681 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC31.26■■■□□ 2.6
NESP48681 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC31.26■■■□□ 2.59
NESP48681 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NESP48681 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
NESP48681 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC31.26■■■□□ 2.59
NESP48681 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NESP48681 POLD4-207ENST00000531239 584 ntTSL 2 BASIC31.26■■■□□ 2.59
NESP48681 DUX4L17-201ENST00000557360 1267 ntBASIC31.26■■■□□ 2.59
NESP48681 DUT-210ENST00000559935 569 ntTSL 3 BASIC31.26■■■□□ 2.59
NESP48681 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
NESP48681 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NESP48681 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC31.26■■■□□ 2.59
NESP48681 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NESP48681 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC31.26■■■□□ 2.59
NESP48681 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC31.25■■■□□ 2.59
NESP48681 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
NESP48681 HLA-DRB6-201ENST00000411500 1235 ntBASIC31.25■■■□□ 2.59
NESP48681 HLA-V-201ENST00000429037 534 ntBASIC31.25■■■□□ 2.59
NESP48681 KRT18P65-201ENST00000439811 1286 ntBASIC31.25■■■□□ 2.59
NESP48681 AC008667.4-201ENST00000607370 168 ntBASIC31.25■■■□□ 2.59
NESP48681 AC004790.2-201ENST00000623588 572 ntBASIC31.25■■■□□ 2.59
NESP48681 AC092902.6-201ENST00000641783 218 ntBASIC31.25■■■□□ 2.59
NESP48681 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
NESP48681 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NESP48681 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
NESP48681 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NESP48681 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NESP48681 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC31.24■■■□□ 2.59
NESP48681 AC004877.2-201ENST00000623941 599 ntBASIC31.24■■■□□ 2.59
NESP48681 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NESP48681 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
NESP48681 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
NESP48681 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NESP48681 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
NESP48681 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC31.24■■■□□ 2.59
NESP48681 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC31.24■■■□□ 2.59
NESP48681 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC31.24■■■□□ 2.59
NESP48681 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC31.24■■■□□ 2.59
NESP48681 PC-214ENST00000628663 1470 ntTSL 5 BASIC31.23■■■□□ 2.59
NESP48681 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC31.23■■■□□ 2.59
NESP48681 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
NESP48681 AC236430.1-201ENST00000402231 743 ntBASIC31.23■■■□□ 2.59
NESP48681 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC31.23■■■□□ 2.59
NESP48681 POLD4-211ENST00000539074 714 ntTSL 3 BASIC31.23■■■□□ 2.59
NESP48681 RIN3-211ENST00000557762 517 ntTSL 3 BASIC31.23■■■□□ 2.59
NESP48681 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC31.23■■■□□ 2.59
NESP48681 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NESP48681 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
NESP48681 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC31.23■■■□□ 2.59
NESP48681 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC31.22■■■□□ 2.59
NESP48681 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
NESP48681 CD9-202ENST00000382515 1229 ntTSL 5 BASIC31.22■■■□□ 2.59
NESP48681 PMS2P4-201ENST00000412466 1052 ntBASIC31.22■■■□□ 2.59
NESP48681 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC31.22■■■□□ 2.59
NESP48681 AC023141.5-201ENST00000458585 616 ntBASIC31.22■■■□□ 2.59
NESP48681 ARTN-206ENST00000472435 402 ntTSL 3 BASIC31.22■■■□□ 2.59
NESP48681 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
NESP48681 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 AC022145.2-201ENST00000598203 171 ntBASIC31.22■■■□□ 2.59
NESP48681 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC31.22■■■□□ 2.59
NESP48681 YTHDF3-AS1-201ENST00000603538 718 ntBASIC31.22■■■□□ 2.59
NESP48681 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 AL589182.2-201ENST00000619332 1049 ntBASIC31.22■■■□□ 2.59
NESP48681 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 AC092667.1-201ENST00000434301 2586 ntBASIC31.22■■■□□ 2.59
NESP48681 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NESP48681 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC31.21■■■□□ 2.59
NESP48681 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NESP48681 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms