Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT6CP48668 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT6CP48668 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KRT6CP48668 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
KRT6CP48668 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT6CP48668 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 MIR1238-201ENST00000408483 83 ntBASIC17.71■□□□□ 0.43
KRT6CP48668 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
KRT6CP48668 AL390955.1-201ENST00000428694 934 ntBASIC17.71■□□□□ 0.43
KRT6CP48668 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT6CP48668 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT6CP48668 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT6CP48668 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT6CP48668 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT6CP48668 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT6CP48668 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KRT6CP48668 FLJ13224-201ENST00000313737 1514 ntBASIC17.71■□□□□ 0.43
KRT6CP48668 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT6CP48668 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
KRT6CP48668 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
KRT6CP48668 SDHAP2-201ENST00000455183 2001 ntBASIC17.71■□□□□ 0.42
KRT6CP48668 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
KRT6CP48668 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6CP48668 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
KRT6CP48668 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KRT6CP48668 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT6CP48668 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6CP48668 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
KRT6CP48668 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
KRT6CP48668 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT6CP48668 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6CP48668 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6CP48668 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT6CP48668 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
KRT6CP48668 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
KRT6CP48668 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
KRT6CP48668 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT6CP48668 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT6CP48668 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KRT6CP48668 AL096828.2-201ENST00000567259 1965 ntBASIC17.7■□□□□ 0.42
KRT6CP48668 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
KRT6CP48668 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
KRT6CP48668 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT6CP48668 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT6CP48668 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
KRT6CP48668 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT6CP48668 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT6CP48668 AC007663.1-201ENST00000438948 1240 ntBASIC17.69■□□□□ 0.42
KRT6CP48668 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT6CP48668 SNORA78-201ENST00000459373 127 ntBASIC17.69■□□□□ 0.42
KRT6CP48668 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT6CP48668 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.69■□□□□ 0.42
KRT6CP48668 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms