Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-1P43699 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-1P43699 AC060766.5-201ENST00000590539 871 ntBASIC14.96□□□□□ -0.01
NKX2-1P43699 AC008687.6-201ENST00000596318 630 ntBASIC14.96□□□□□ -0.01
NKX2-1P43699 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.96□□□□□ -0.01
NKX2-1P43699 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NKX2-1P43699 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NKX2-1P43699 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-1P43699 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-1P43699 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-1P43699 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
NKX2-1P43699 PP12613-201ENST00000424958 2230 ntBASIC14.96□□□□□ -0.02
NKX2-1P43699 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.96□□□□□ -0.02
NKX2-1P43699 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NKX2-1P43699 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 AL023806.1-201ENST00000603994 1649 ntBASIC14.95□□□□□ -0.02
NKX2-1P43699 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 NFIC-211ENST00000641145 8399 ntBASIC14.95□□□□□ -0.02
NKX2-1P43699 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 KRT8P11-201ENST00000409686 1436 ntBASIC14.95□□□□□ -0.02
NKX2-1P43699 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX2-1P43699 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 PRSS44-201ENST00000515154 1146 ntBASIC14.95□□□□□ -0.02
NKX2-1P43699 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.95□□□□□ -0.02
NKX2-1P43699 AC004264.1-201ENST00000608354 794 ntBASIC14.95□□□□□ -0.02
NKX2-1P43699 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX2-1P43699 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NKX2-1P43699 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NKX2-1P43699 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX2-1P43699 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-1P43699 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX2-1P43699 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 AC006116.8-202ENST00000587620 1550 ntBASIC14.94□□□□□ -0.02
NKX2-1P43699 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NKX2-1P43699 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-1P43699 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
NKX2-1P43699 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NKX2-1P43699 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-1P43699 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX2-1P43699 RCC2P3-201ENST00000418112 1537 ntBASIC14.94□□□□□ -0.02
NKX2-1P43699 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX2-1P43699 NCF1B-203ENST00000435988 1254 ntBASIC14.94□□□□□ -0.02
NKX2-1P43699 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX2-1P43699 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 SOX15-203ENST00000570788 1093 ntBASIC14.94□□□□□ -0.02
NKX2-1P43699 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NKX2-1P43699 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX2-1P43699 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.94□□□□□ -0.02
NKX2-1P43699 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NKX2-1P43699 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX2-1P43699 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms