Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCN1P35523 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCN1P35523 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLCN1P35523 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.78■□□□□ 0.92
CLCN1P35523 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.78■□□□□ 0.92
CLCN1P35523 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.78■□□□□ 0.92
CLCN1P35523 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.78■□□□□ 0.92
CLCN1P35523 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 MTDHP1-201ENST00000605323 784 ntBASIC20.78■□□□□ 0.92
CLCN1P35523 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.78■□□□□ 0.92
CLCN1P35523 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLCN1P35523 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCN1P35523 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.77■□□□□ 0.92
CLCN1P35523 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN1P35523 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
CLCN1P35523 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN1P35523 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN1P35523 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.77■□□□□ 0.92
CLCN1P35523 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN1P35523 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN1P35523 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CLCN1P35523 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 AC069544.1-201ENST00000609399 999 ntBASIC20.77■□□□□ 0.92
CLCN1P35523 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CLCN1P35523 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.77■□□□□ 0.92
CLCN1P35523 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN1P35523 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CLCN1P35523 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLCN1P35523 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CLCN1P35523 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLCN1P35523 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CLCN1P35523 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLCN1P35523 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CLCN1P35523 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CLCN1P35523 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLCN1P35523 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 AC138932.1-201ENST00000534164 6830 ntBASIC20.76■□□□□ 0.91
CLCN1P35523 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLCN1P35523 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.76■□□□□ 0.91
CLCN1P35523 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN1P35523 LINC02199-201ENST00000506655 2702 ntBASIC20.76■□□□□ 0.91
CLCN1P35523 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
CLCN1P35523 KRT17P3-201ENST00000420566 1262 ntBASIC20.76■□□□□ 0.91
CLCN1P35523 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.76■□□□□ 0.91
CLCN1P35523 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN1P35523 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CLCN1P35523 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.76■□□□□ 0.91
CLCN1P35523 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms