Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.33■□□□□ 0.36
RORAP35398 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RORAP35398 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.33■□□□□ 0.36
RORAP35398 IGHV3-41-201ENST00000613121 348 ntBASIC17.33■□□□□ 0.36
RORAP35398 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RORAP35398 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RORAP35398 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RORAP35398 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.33■□□□□ 0.36
RORAP35398 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.33■□□□□ 0.36
RORAP35398 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
RORAP35398 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RORAP35398 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.32■□□□□ 0.36
RORAP35398 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 CROCCP3-202ENST00000420820 1947 ntBASIC17.32■□□□□ 0.36
RORAP35398 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.32■□□□□ 0.36
RORAP35398 RN7SL606P-201ENST00000472779 293 ntBASIC17.32■□□□□ 0.36
RORAP35398 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RORAP35398 AP000867.3-201ENST00000524675 377 ntBASIC17.32■□□□□ 0.36
RORAP35398 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.32■□□□□ 0.36
RORAP35398 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.32■□□□□ 0.36
RORAP35398 AC012615.1-201ENST00000565797 1299 ntBASIC17.32■□□□□ 0.36
RORAP35398 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.32■□□□□ 0.36
RORAP35398 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RORAP35398 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.32■□□□□ 0.36
RORAP35398 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RORAP35398 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
RORAP35398 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.31■□□□□ 0.36
RORAP35398 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.31■□□□□ 0.36
RORAP35398 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 AL353692.3-201ENST00000407031 1396 ntBASIC17.31■□□□□ 0.36
RORAP35398 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.31■□□□□ 0.36
RORAP35398 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.31■□□□□ 0.36
RORAP35398 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
RORAP35398 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RORAP35398 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.31■□□□□ 0.36
RORAP35398 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.31■□□□□ 0.36
RORAP35398 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.31■□□□□ 0.36
RORAP35398 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.31■□□□□ 0.36
RORAP35398 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 AL592071.1-201ENST00000611956 408 ntBASIC17.31■□□□□ 0.36
RORAP35398 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.31■□□□□ 0.36
RORAP35398 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RORAP35398 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RORAP35398 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RORAP35398 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.31■□□□□ 0.36
RORAP35398 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 AL031598.1-201ENST00000561511 1773 ntBASIC17.3■□□□□ 0.36
RORAP35398 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.3■□□□□ 0.36
RORAP35398 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.3■□□□□ 0.36
RORAP35398 TSPY19P-201ENST00000418461 509 ntBASIC17.3■□□□□ 0.36
RORAP35398 AC026396.1-201ENST00000419388 421 ntBASIC17.3■□□□□ 0.36
RORAP35398 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
RORAP35398 TSPY18P-201ENST00000441642 509 ntBASIC17.3■□□□□ 0.36
RORAP35398 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RORAP35398 AC111152.3-201ENST00000569699 673 ntBASIC17.3■□□□□ 0.36
RORAP35398 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.3■□□□□ 0.36
RORAP35398 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.3■□□□□ 0.36
RORAP35398 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RORAP35398 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RORAP35398 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
RORAP35398 AC009102.3-201ENST00000623118 1491 ntBASIC17.3■□□□□ 0.36
RORAP35398 ANO7L1-203ENST00000602586 1720 ntBASIC17.3■□□□□ 0.36
RORAP35398 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RORAP35398 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RORAP35398 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.29■□□□□ 0.36
RORAP35398 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RORAP35398 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.29■□□□□ 0.36
RORAP35398 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RORAP35398 AC233702.3-201ENST00000578656 1387 ntBASIC17.29■□□□□ 0.36
RORAP35398 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms