Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HOXC8P31273 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC8P31273 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
HOXC8P31273 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HOXC8P31273 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC8P31273 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC8P31273 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC8P31273 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXC8P31273 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.85■□□□□ 0.77
HOXC8P31273 IGHV3-22-201ENST00000520721 359 ntBASIC19.85■□□□□ 0.77
HOXC8P31273 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.85■□□□□ 0.77
HOXC8P31273 AC025062.2-201ENST00000605477 670 ntBASIC19.85■□□□□ 0.77
HOXC8P31273 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
HOXC8P31273 AP000867.4-201ENST00000641616 219 ntBASIC19.85■□□□□ 0.77
HOXC8P31273 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
HOXC8P31273 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC8P31273 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HOXC8P31273 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC8P31273 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC8P31273 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC8P31273 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC8P31273 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC8P31273 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC8P31273 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC8P31273 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC8P31273 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC8P31273 GMCL1P1-201ENST00000463439 1581 ntBASIC19.84■□□□□ 0.77
HOXC8P31273 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
HOXC8P31273 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXC8P31273 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC8P31273 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXC8P31273 RPL13AP23-201ENST00000480739 586 ntBASIC19.84■□□□□ 0.77
HOXC8P31273 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXC8P31273 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXC8P31273 AC145285.3-201ENST00000564603 959 ntBASIC19.84■□□□□ 0.77
HOXC8P31273 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.84■□□□□ 0.77
HOXC8P31273 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXC8P31273 AL139288.1-201ENST00000623748 933 ntBASIC19.84■□□□□ 0.77
HOXC8P31273 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
HOXC8P31273 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HOXC8P31273 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC8P31273 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXC8P31273 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HOXC8P31273 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXC8P31273 AL356309.3-201ENST00000624132 1934 ntBASIC19.83■□□□□ 0.77
HOXC8P31273 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC8P31273 AC096633.1-201ENST00000422446 749 ntBASIC19.83■□□□□ 0.77
HOXC8P31273 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.83■□□□□ 0.77
HOXC8P31273 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXC8P31273 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXC8P31273 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.83■□□□□ 0.77
HOXC8P31273 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC8P31273 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HOXC8P31273 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC8P31273 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC8P31273 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC8P31273 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC8P31273 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXC8P31273 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC8P31273 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXC8P31273 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 RPS2P28-201ENST00000314255 741 ntBASIC19.82■□□□□ 0.76
HOXC8P31273 AC007967.3-201ENST00000434308 558 ntBASIC19.82■□□□□ 0.76
HOXC8P31273 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.82■□□□□ 0.76
HOXC8P31273 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXC8P31273 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HOXC8P31273 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXC8P31273 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXC8P31273 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXC8P31273 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC8P31273 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HOXC8P31273 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HOXC8P31273 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC8P31273 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC8P31273 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC8P31273 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HOXC8P31273 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms