Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA11P31270 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 KRT8P10-201ENST00000450021 1447 ntBASIC19.68■□□□□ 0.74
HOXA11P31270 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA11P31270 PHGDH-209ENST00000641074 1780 ntBASIC19.67■□□□□ 0.74
HOXA11P31270 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXA11P31270 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXA11P31270 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA11P31270 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA11P31270 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA11P31270 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA11P31270 AC093503.3-201ENST00000624917 2352 ntBASIC19.67■□□□□ 0.74
HOXA11P31270 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA11P31270 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.67■□□□□ 0.74
HOXA11P31270 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXA11P31270 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXA11P31270 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 AC125634.1-201ENST00000438758 1403 ntBASIC19.67■□□□□ 0.74
HOXA11P31270 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXA11P31270 TP73-AS1-210ENST00000637775 1455 ntBASIC19.67■□□□□ 0.74
HOXA11P31270 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXA11P31270 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXA11P31270 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA11P31270 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXA11P31270 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA11P31270 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HOXA11P31270 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXA11P31270 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXA11P31270 AC096582.2-201ENST00000510860 516 ntBASIC19.66■□□□□ 0.74
HOXA11P31270 AF238378.1-201ENST00000526806 358 ntBASIC19.66■□□□□ 0.74
HOXA11P31270 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXA11P31270 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
HOXA11P31270 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXA11P31270 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXA11P31270 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HOXA11P31270 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA11P31270 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXA11P31270 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXA11P31270 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXA11P31270 WIZP1-201ENST00000531444 2299 ntBASIC19.65■□□□□ 0.74
HOXA11P31270 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA11P31270 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
HOXA11P31270 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXA11P31270 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA11P31270 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA11P31270 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA11P31270 AC112698.1-201ENST00000510299 916 ntBASIC19.65■□□□□ 0.74
HOXA11P31270 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HOXA11P31270 AL121912.1-201ENST00000603683 238 ntBASIC19.65■□□□□ 0.74
HOXA11P31270 AL591684.3-201ENST00000605187 298 ntBASIC19.65■□□□□ 0.74
HOXA11P31270 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA11P31270 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA11P31270 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA11P31270 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA11P31270 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXA11P31270 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXA11P31270 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXA11P31270 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA11P31270 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXA11P31270 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.64■□□□□ 0.74
HOXA11P31270 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.64■□□□□ 0.74
HOXA11P31270 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HOXA11P31270 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
HOXA11P31270 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA11P31270 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA11P31270 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms