Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A5P29400 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A5P29400 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.82■■□□□ 1.08
COL4A5P29400 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.82■■□□□ 1.08
COL4A5P29400 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A5P29400 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A5P29400 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.82■■□□□ 1.08
COL4A5P29400 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.82■■□□□ 1.08
COL4A5P29400 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.82■■□□□ 1.08
COL4A5P29400 MTDHP5-201ENST00000598980 586 ntBASIC21.82■■□□□ 1.08
COL4A5P29400 AC092865.6-201ENST00000642101 219 ntBASIC21.82■■□□□ 1.08
COL4A5P29400 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A5P29400 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A5P29400 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COL4A5P29400 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A5P29400 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A5P29400 PMPCAP1-201ENST00000508114 1576 ntBASIC21.82■■□□□ 1.08
COL4A5P29400 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
COL4A5P29400 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A5P29400 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.82■■□□□ 1.08
COL4A5P29400 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
COL4A5P29400 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A5P29400 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A5P29400 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.82■■□□□ 1.08
COL4A5P29400 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A5P29400 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.82■■□□□ 1.08
COL4A5P29400 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL4A5P29400 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A5P29400 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A5P29400 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL4A5P29400 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
COL4A5P29400 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COL4A5P29400 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
COL4A5P29400 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.81■■□□□ 1.08
COL4A5P29400 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
COL4A5P29400 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.81■■□□□ 1.08
COL4A5P29400 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL4A5P29400 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.8■■□□□ 1.08
COL4A5P29400 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A5P29400 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A5P29400 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A5P29400 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A5P29400 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.8■■□□□ 1.08
COL4A5P29400 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A5P29400 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A5P29400 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.8■■□□□ 1.08
COL4A5P29400 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.8■■□□□ 1.08
COL4A5P29400 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.8■■□□□ 1.08
COL4A5P29400 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.8■■□□□ 1.08
COL4A5P29400 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
COL4A5P29400 AC093484.2-201ENST00000580996 2166 ntBASIC21.8■■□□□ 1.08
COL4A5P29400 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A5P29400 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
COL4A5P29400 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
COL4A5P29400 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
COL4A5P29400 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A5P29400 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL4A5P29400 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 AC007952.6-201ENST00000573168 2673 ntBASIC21.79■■□□□ 1.08
COL4A5P29400 AC003957.1-201ENST00000625108 2673 ntBASIC21.79■■□□□ 1.08
COL4A5P29400 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
COL4A5P29400 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL4A5P29400 ELK2BP-201ENST00000415014 1224 ntBASIC21.79■■□□□ 1.08
COL4A5P29400 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
COL4A5P29400 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A5P29400 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A5P29400 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL4A5P29400 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL4A5P29400 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.79■■□□□ 1.08
COL4A5P29400 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 AC010460.3-201ENST00000511359 1579 ntBASIC21.79■■□□□ 1.08
COL4A5P29400 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.79■■□□□ 1.08
COL4A5P29400 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 AC005082.1-201ENST00000413042 2259 ntBASIC21.79■■□□□ 1.08
COL4A5P29400 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.79■■□□□ 1.08
COL4A5P29400 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
COL4A5P29400 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A5P29400 MIR3197-201ENST00000582241 73 ntBASIC21.79■■□□□ 1.08
COL4A5P29400 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.79■■□□□ 1.08
COL4A5P29400 AC027612.4-201ENST00000605371 583 ntBASIC21.79■■□□□ 1.08
COL4A5P29400 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL4A5P29400 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A5P29400 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms