Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN6P29350 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.33■□□□□ 0.37
PTPN6P29350 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN6P29350 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN6P29350 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTPN6P29350 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN6P29350 INGX-201ENST00000359239 846 ntBASIC17.33■□□□□ 0.36
PTPN6P29350 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PTPN6P29350 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 CCR12P-201ENST00000446203 998 ntBASIC17.33■□□□□ 0.36
PTPN6P29350 AC128688.1-201ENST00000487626 519 ntBASIC17.33■□□□□ 0.36
PTPN6P29350 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN6P29350 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.33■□□□□ 0.36
PTPN6P29350 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.33■□□□□ 0.36
PTPN6P29350 MIR3180-5-201ENST00000583743 153 ntBASIC17.33■□□□□ 0.36
PTPN6P29350 AC116562.4-202ENST00000641738 218 ntBASIC17.33■□□□□ 0.36
PTPN6P29350 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPN6P29350 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPN6P29350 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PTPN6P29350 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN6P29350 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.33■□□□□ 0.36
PTPN6P29350 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN6P29350 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTPN6P29350 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN6P29350 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN6P29350 AL163051.1-201ENST00000569214 1512 ntBASIC17.32■□□□□ 0.36
PTPN6P29350 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPN6P29350 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN6P29350 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
PTPN6P29350 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN6P29350 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PTPN6P29350 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.32■□□□□ 0.36
PTPN6P29350 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN6P29350 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN6P29350 AL023803.3-201ENST00000615559 522 ntBASIC17.32■□□□□ 0.36
PTPN6P29350 AC005363.2-201ENST00000618631 242 ntBASIC17.32■□□□□ 0.36
PTPN6P29350 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN6P29350 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN6P29350 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN6P29350 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN6P29350 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PTPN6P29350 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN6P29350 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPN6P29350 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN6P29350 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.31■□□□□ 0.36
PTPN6P29350 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN6P29350 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN6P29350 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PTPN6P29350 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN6P29350 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 SLC25A3P1-201ENST00000443844 931 ntBASIC17.31■□□□□ 0.36
PTPN6P29350 ECEL1P2-202ENST00000465689 757 ntBASIC17.31■□□□□ 0.36
PTPN6P29350 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN6P29350 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PTPN6P29350 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN6P29350 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN6P29350 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN6P29350 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN6P29350 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 AC092338.2-201ENST00000568827 1415 ntBASIC17.3■□□□□ 0.36
PTPN6P29350 HOXB1-202ENST00000577092 1414 ntBASIC17.3■□□□□ 0.36
PTPN6P29350 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN6P29350 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN6P29350 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN6P29350 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms