Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.81■□□□□ 0.28
ABCD3P28288 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.81■□□□□ 0.28
ABCD3P28288 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ABCD3P28288 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ABCD3P28288 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.81■□□□□ 0.28
ABCD3P28288 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.81■□□□□ 0.28
ABCD3P28288 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.81■□□□□ 0.28
ABCD3P28288 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.81■□□□□ 0.28
ABCD3P28288 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ABCD3P28288 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ABCD3P28288 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.8■□□□□ 0.28
ABCD3P28288 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ABCD3P28288 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.8■□□□□ 0.28
ABCD3P28288 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ABCD3P28288 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ABCD3P28288 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
ABCD3P28288 PCED1CP-201ENST00000419887 785 ntBASIC16.8■□□□□ 0.28
ABCD3P28288 AP003733.1-201ENST00000491725 852 ntBASIC16.8■□□□□ 0.28
ABCD3P28288 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.8■□□□□ 0.28
ABCD3P28288 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.8■□□□□ 0.28
ABCD3P28288 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD3P28288 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
ABCD3P28288 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.8■□□□□ 0.28
ABCD3P28288 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD3P28288 AL358472.4-201ENST00000633140 710 ntBASIC16.8■□□□□ 0.28
ABCD3P28288 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.8■□□□□ 0.28
ABCD3P28288 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.8■□□□□ 0.28
ABCD3P28288 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ABCD3P28288 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD3P28288 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ABCD3P28288 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
ABCD3P28288 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.79■□□□□ 0.28
ABCD3P28288 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ABCD3P28288 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD3P28288 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD3P28288 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD3P28288 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.79■□□□□ 0.28
ABCD3P28288 AC116407.4-201ENST00000623319 1061 ntBASIC16.79■□□□□ 0.28
ABCD3P28288 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 AC135776.1-201ENST00000319817 2481 ntBASIC16.79■□□□□ 0.28
ABCD3P28288 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
ABCD3P28288 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ABCD3P28288 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.79■□□□□ 0.28
ABCD3P28288 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ABCD3P28288 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
ABCD3P28288 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.78■□□□□ 0.28
ABCD3P28288 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.78■□□□□ 0.28
ABCD3P28288 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ABCD3P28288 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.78■□□□□ 0.28
ABCD3P28288 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.78■□□□□ 0.28
ABCD3P28288 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ABCD3P28288 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.78■□□□□ 0.28
ABCD3P28288 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.78■□□□□ 0.28
ABCD3P28288 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms