Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.53■□□□□ 0.24
GDF1P27539 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GDF1P27539 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GDF1P27539 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 AL024508.2-201ENST00000607749 1894 ntBASIC16.53■□□□□ 0.24
GDF1P27539 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GDF1P27539 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.53■□□□□ 0.24
GDF1P27539 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
GDF1P27539 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
GDF1P27539 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.53■□□□□ 0.24
GDF1P27539 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.53■□□□□ 0.24
GDF1P27539 LINC00265-3P-201ENST00000447588 903 ntBASIC16.53■□□□□ 0.24
GDF1P27539 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.53■□□□□ 0.24
GDF1P27539 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.53■□□□□ 0.24
GDF1P27539 MIR3652-201ENST00000579335 131 ntBASIC16.53■□□□□ 0.24
GDF1P27539 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GDF1P27539 CLEC4GP1-201ENST00000596555 870 ntBASIC16.53■□□□□ 0.24
GDF1P27539 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GDF1P27539 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.53■□□□□ 0.24
GDF1P27539 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GDF1P27539 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
GDF1P27539 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GDF1P27539 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.53■□□□□ 0.24
GDF1P27539 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GDF1P27539 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.53■□□□□ 0.24
GDF1P27539 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GDF1P27539 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GDF1P27539 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.52■□□□□ 0.24
GDF1P27539 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.52■□□□□ 0.24
GDF1P27539 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
GDF1P27539 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.52■□□□□ 0.24
GDF1P27539 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.52■□□□□ 0.24
GDF1P27539 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.52■□□□□ 0.24
GDF1P27539 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GDF1P27539 PRELID1P1-202ENST00000567272 903 ntBASIC16.52■□□□□ 0.24
GDF1P27539 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GDF1P27539 MIR3180-1-201ENST00000580374 94 ntBASIC16.52■□□□□ 0.24
GDF1P27539 MIR3180-3-201ENST00000584616 94 ntBASIC16.52■□□□□ 0.24
GDF1P27539 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.52■□□□□ 0.24
GDF1P27539 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.52■□□□□ 0.24
GDF1P27539 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.52■□□□□ 0.24
GDF1P27539 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
GDF1P27539 AC124864.1-201ENST00000623408 392 ntBASIC16.52■□□□□ 0.24
GDF1P27539 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.52■□□□□ 0.24
GDF1P27539 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GDF1P27539 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDF1P27539 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
GDF1P27539 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GDF1P27539 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GDF1P27539 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
GDF1P27539 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDF1P27539 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDF1P27539 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDF1P27539 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GDF1P27539 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
GDF1P27539 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
GDF1P27539 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.51■□□□□ 0.23
GDF1P27539 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.51■□□□□ 0.23
GDF1P27539 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 TOB2P1-201ENST00000469761 992 ntBASIC16.51■□□□□ 0.23
GDF1P27539 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GDF1P27539 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.51■□□□□ 0.23
GDF1P27539 AP000867.3-201ENST00000524675 377 ntBASIC16.51■□□□□ 0.23
GDF1P27539 TPSP2-201ENST00000561760 610 ntBASIC16.51■□□□□ 0.23
GDF1P27539 AL592071.1-201ENST00000611956 408 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms