Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP11P24347 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP11P24347 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
MMP11P24347 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP11P24347 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP11P24347 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP11P24347 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
MMP11P24347 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP11P24347 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP11P24347 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
MMP11P24347 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP11P24347 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP11P24347 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
MMP11P24347 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP11P24347 AL133373.2-201ENST00000623187 2828 ntBASIC17.33■□□□□ 0.36
MMP11P24347 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MMP11P24347 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP11P24347 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.33■□□□□ 0.36
MMP11P24347 TSSC2-201ENST00000450217 709 ntBASIC17.33■□□□□ 0.36
MMP11P24347 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.33■□□□□ 0.36
MMP11P24347 NPAP1P7-201ENST00000613027 823 ntBASIC17.33■□□□□ 0.36
MMP11P24347 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.33■□□□□ 0.36
MMP11P24347 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP11P24347 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP11P24347 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MMP11P24347 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MMP11P24347 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP11P24347 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
MMP11P24347 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP11P24347 HEIH-201ENST00000623091 1652 ntBASIC17.32■□□□□ 0.36
MMP11P24347 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.32■□□□□ 0.36
MMP11P24347 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP11P24347 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MMP11P24347 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MMP11P24347 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP11P24347 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP11P24347 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
MMP11P24347 PVRIG2P-201ENST00000435460 978 ntBASIC17.32■□□□□ 0.36
MMP11P24347 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.32■□□□□ 0.36
MMP11P24347 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.32■□□□□ 0.36
MMP11P24347 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.32■□□□□ 0.36
MMP11P24347 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.32■□□□□ 0.36
MMP11P24347 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
MMP11P24347 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP11P24347 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MMP11P24347 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.32■□□□□ 0.36
MMP11P24347 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP11P24347 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 AC016734.2-201ENST00000624325 1377 ntBASIC17.31■□□□□ 0.36
MMP11P24347 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP11P24347 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 NOC2LP1-202ENST00000452600 2235 ntBASIC17.31■□□□□ 0.36
MMP11P24347 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MMP11P24347 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
MMP11P24347 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
MMP11P24347 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.31■□□□□ 0.36
MMP11P24347 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 KRT8P26-201ENST00000534154 1276 ntBASIC17.31■□□□□ 0.36
MMP11P24347 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.31■□□□□ 0.36
MMP11P24347 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.31■□□□□ 0.36
MMP11P24347 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.31■□□□□ 0.36
MMP11P24347 AC009065.1-201ENST00000564055 1225 ntBASIC17.31■□□□□ 0.36
MMP11P24347 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
MMP11P24347 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP11P24347 CLEC4GP1-201ENST00000596555 870 ntBASIC17.31■□□□□ 0.36
MMP11P24347 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP11P24347 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP11P24347 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP11P24347 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP11P24347 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms