Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.28■■□□□ 1.16
KCNA3P22001 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNA3P22001 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
KCNA3P22001 AC027612.4-201ENST00000605371 583 ntBASIC22.28■■□□□ 1.16
KCNA3P22001 AL513190.1-201ENST00000621254 727 ntBASIC22.28■■□□□ 1.16
KCNA3P22001 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNA3P22001 PMPCAP1-201ENST00000508114 1576 ntBASIC22.28■■□□□ 1.16
KCNA3P22001 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNA3P22001 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNA3P22001 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNA3P22001 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNA3P22001 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNA3P22001 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNA3P22001 LINC01006-201ENST00000333319 2292 ntBASIC22.27■■□□□ 1.16
KCNA3P22001 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNA3P22001 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
KCNA3P22001 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.27■■□□□ 1.16
KCNA3P22001 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.27■■□□□ 1.16
KCNA3P22001 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNA3P22001 PRYP5-201ENST00000451909 266 ntBASIC22.27■■□□□ 1.16
KCNA3P22001 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.27■■□□□ 1.16
KCNA3P22001 AC136632.2-201ENST00000512891 861 ntBASIC22.27■■□□□ 1.16
KCNA3P22001 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.27■■□□□ 1.16
KCNA3P22001 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNA3P22001 AC006557.2-201ENST00000592985 1240 ntBASIC22.27■■□□□ 1.16
KCNA3P22001 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.27■■□□□ 1.16
KCNA3P22001 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNA3P22001 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNA3P22001 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.27■■□□□ 1.16
KCNA3P22001 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNA3P22001 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNA3P22001 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNA3P22001 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNA3P22001 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KCNA3P22001 ELL2P1-201ENST00000413990 1906 ntBASIC22.26■■□□□ 1.15
KCNA3P22001 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNA3P22001 CD82-202ENST00000342935 967 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNA3P22001 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.26■■□□□ 1.15
KCNA3P22001 MKNK2P1-201ENST00000437526 628 ntBASIC22.26■■□□□ 1.15
KCNA3P22001 KRT18P65-201ENST00000439811 1286 ntBASIC22.26■■□□□ 1.15
KCNA3P22001 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.26■■□□□ 1.15
KCNA3P22001 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.26■■□□□ 1.15
KCNA3P22001 AC112698.1-201ENST00000510299 916 ntBASIC22.26■■□□□ 1.15
KCNA3P22001 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.26■■□□□ 1.15
KCNA3P22001 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KCNA3P22001 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
KCNA3P22001 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNA3P22001 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC22.26■■□□□ 1.15
KCNA3P22001 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNA3P22001 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNA3P22001 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNA3P22001 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNA3P22001 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNA3P22001 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.25■■□□□ 1.15
KCNA3P22001 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.25■■□□□ 1.15
KCNA3P22001 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.25■■□□□ 1.15
KCNA3P22001 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
KCNA3P22001 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.25■■□□□ 1.15
KCNA3P22001 AC011467.4-201ENST00000594891 528 ntBASIC22.25■■□□□ 1.15
KCNA3P22001 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KCNA3P22001 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KCNA3P22001 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.24■■□□□ 1.15
KCNA3P22001 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KCNA3P22001 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.24■■□□□ 1.15
KCNA3P22001 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KCNA3P22001 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
KCNA3P22001 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.24■■□□□ 1.15
KCNA3P22001 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KCNA3P22001 ATP6V0CP3-201ENST00000417255 467 ntBASIC22.24■■□□□ 1.15
KCNA3P22001 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.24■■□□□ 1.15
KCNA3P22001 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.24■■□□□ 1.15
KCNA3P22001 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.24■■□□□ 1.15
KCNA3P22001 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.24■■□□□ 1.15
KCNA3P22001 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.24■■□□□ 1.15
KCNA3P22001 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC22.24■■□□□ 1.15
KCNA3P22001 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.24■■□□□ 1.15
KCNA3P22001 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.24■■□□□ 1.15
KCNA3P22001 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
KCNA3P22001 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
KCNA3P22001 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
KCNA3P22001 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.24■■□□□ 1.15
KCNA3P22001 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
KCNA3P22001 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
KCNA3P22001 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
KCNA3P22001 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
KCNA3P22001 LINC01126-201ENST00000623515 1646 ntBASIC22.24■■□□□ 1.15
KCNA3P22001 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.23■■□□□ 1.15
KCNA3P22001 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
KCNA3P22001 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KCNA3P22001 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
KCNA3P22001 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
KCNA3P22001 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
KCNA3P22001 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
KCNA3P22001 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.23■■□□□ 1.15
KCNA3P22001 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
KCNA3P22001 AC007967.3-201ENST00000434308 558 ntBASIC22.23■■□□□ 1.15
KCNA3P22001 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
KCNA3P22001 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.23■■□□□ 1.15
KCNA3P22001 AC018845.2-201ENST00000568326 409 ntBASIC22.23■■□□□ 1.15
KCNA3P22001 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms