Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.28■□□□□ 0.36
NCK1P16333 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NCK1P16333 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NCK1P16333 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.28■□□□□ 0.36
NCK1P16333 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.28■□□□□ 0.36
NCK1P16333 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NCK1P16333 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCK1P16333 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.28■□□□□ 0.36
NCK1P16333 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.27■□□□□ 0.36
NCK1P16333 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
NCK1P16333 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.27■□□□□ 0.36
NCK1P16333 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 AL109659.2-201ENST00000606809 1674 ntBASIC17.27■□□□□ 0.36
NCK1P16333 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NCK1P16333 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NCK1P16333 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
NCK1P16333 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NCK1P16333 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 AC239809.2-201ENST00000415381 517 ntBASIC17.27■□□□□ 0.36
NCK1P16333 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.27■□□□□ 0.36
NCK1P16333 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
NCK1P16333 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCK1P16333 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NCK1P16333 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.27■□□□□ 0.36
NCK1P16333 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCK1P16333 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.27■□□□□ 0.35
NCK1P16333 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NCK1P16333 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCK1P16333 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCK1P16333 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCK1P16333 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCK1P16333 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NCK1P16333 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCK1P16333 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NCK1P16333 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.26■□□□□ 0.35
NCK1P16333 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.26■□□□□ 0.35
NCK1P16333 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.26■□□□□ 0.35
NCK1P16333 AC004951.3-201ENST00000418645 1148 ntBASIC17.26■□□□□ 0.35
NCK1P16333 KRT17P3-201ENST00000420566 1262 ntBASIC17.26■□□□□ 0.35
NCK1P16333 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.26■□□□□ 0.35
NCK1P16333 RPS2P4-201ENST00000476944 856 ntBASIC17.26■□□□□ 0.35
NCK1P16333 AP003097.1-201ENST00000530657 1135 ntBASIC17.26■□□□□ 0.35
NCK1P16333 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.26■□□□□ 0.35
NCK1P16333 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.26■□□□□ 0.35
NCK1P16333 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.26■□□□□ 0.35
NCK1P16333 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
NCK1P16333 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.26■□□□□ 0.35
NCK1P16333 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.26■□□□□ 0.35
NCK1P16333 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 AC022211.2-201ENST00000585075 2527 ntBASIC17.26■□□□□ 0.35
NCK1P16333 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.26■□□□□ 0.35
NCK1P16333 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCK1P16333 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NCK1P16333 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NCK1P16333 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NCK1P16333 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NCK1P16333 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NCK1P16333 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NCK1P16333 AD000864.1-201ENST00000624076 2295 ntBASIC17.25■□□□□ 0.35
NCK1P16333 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NCK1P16333 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.25■□□□□ 0.35
NCK1P16333 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.25■□□□□ 0.35
NCK1P16333 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.25■□□□□ 0.35
NCK1P16333 NIFKP9-201ENST00000419265 221 ntBASIC17.25■□□□□ 0.35
NCK1P16333 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.25■□□□□ 0.35
NCK1P16333 AC008040.2-201ENST00000461049 708 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms