Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 AL137013.1-201ENST00000432946 1228 ntBASIC19.25■□□□□ 0.67
KRT3P12035 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT3P12035 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT3P12035 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 AC018470.1-201ENST00000624790 3129 ntBASIC19.25■□□□□ 0.67
KRT3P12035 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT3P12035 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT3P12035 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT3P12035 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT3P12035 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT3P12035 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
KRT3P12035 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 REXO1L9P-201ENST00000604264 2108 ntBASIC19.24■□□□□ 0.67
KRT3P12035 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT3P12035 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
KRT3P12035 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.24■□□□□ 0.67
KRT3P12035 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 AC140113.3-201ENST00000605663 199 ntBASIC19.24■□□□□ 0.67
KRT3P12035 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT3P12035 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT3P12035 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
KRT3P12035 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
KRT3P12035 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.23■□□□□ 0.67
KRT3P12035 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.23■□□□□ 0.67
KRT3P12035 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 LINC01126-201ENST00000623515 1646 ntBASIC19.23■□□□□ 0.67
KRT3P12035 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 TERF1P1-201ENST00000311003 1181 ntBASIC19.23■□□□□ 0.67
KRT3P12035 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT3P12035 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.23■□□□□ 0.67
KRT3P12035 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 GCSHP2-201ENST00000560971 527 ntBASIC19.23■□□□□ 0.67
KRT3P12035 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.23■□□□□ 0.67
KRT3P12035 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT3P12035 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 AL023973.1-201ENST00000624619 620 ntBASIC19.23■□□□□ 0.67
KRT3P12035 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
KRT3P12035 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT3P12035 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT3P12035 AL096828.2-201ENST00000567259 1965 ntBASIC19.23■□□□□ 0.67
KRT3P12035 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRT3P12035 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KRT3P12035 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT3P12035 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT3P12035 COX11P1-201ENST00000489116 835 ntBASIC19.22■□□□□ 0.67
KRT3P12035 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT3P12035 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.22■□□□□ 0.67
KRT3P12035 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT3P12035 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT3P12035 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
KRT3P12035 LINC01023-201ENST00000606054 436 ntBASIC19.22■□□□□ 0.67
KRT3P12035 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT3P12035 AL031432.5-201ENST00000641059 760 ntBASIC19.22■□□□□ 0.67
KRT3P12035 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
KRT3P12035 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms