Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.27□□□□□ -0.12
CD28P10747 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 AL163051.1-201ENST00000569214 1512 ntBASIC14.27□□□□□ -0.12
CD28P10747 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD28P10747 KRT8P10-201ENST00000450021 1447 ntBASIC14.27□□□□□ -0.12
CD28P10747 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.27□□□□□ -0.12
CD28P10747 OR6D1P-202ENST00000641007 5290 ntBASIC14.27□□□□□ -0.13
CD28P10747 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD28P10747 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.27□□□□□ -0.13
CD28P10747 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.27□□□□□ -0.13
CD28P10747 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.27□□□□□ -0.13
CD28P10747 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.27□□□□□ -0.13
CD28P10747 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.27□□□□□ -0.13
CD28P10747 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.27□□□□□ -0.13
CD28P10747 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.27□□□□□ -0.13
CD28P10747 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 AC116562.4-201ENST00000641316 2276 ntBASIC14.27□□□□□ -0.13
CD28P10747 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.27□□□□□ -0.13
CD28P10747 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD28P10747 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD28P10747 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD28P10747 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD28P10747 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD28P10747 AC099343.3-201ENST00000605834 2503 ntBASIC14.26□□□□□ -0.13
CD28P10747 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CD28P10747 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CD28P10747 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD28P10747 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.26□□□□□ -0.13
CD28P10747 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.26□□□□□ -0.13
CD28P10747 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CD28P10747 AP000593.1-201ENST00000393668 712 ntBASIC14.26□□□□□ -0.13
CD28P10747 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.26□□□□□ -0.13
CD28P10747 FDX1P1-201ENST00000449115 551 ntBASIC14.26□□□□□ -0.13
CD28P10747 KRT17P6-201ENST00000453795 1220 ntBASIC14.26□□□□□ -0.13
CD28P10747 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.26□□□□□ -0.13
CD28P10747 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.26□□□□□ -0.13
CD28P10747 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.26□□□□□ -0.13
CD28P10747 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD28P10747 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.26□□□□□ -0.13
CD28P10747 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CD28P10747 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD28P10747 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.25□□□□□ -0.13
CD28P10747 AC018445.3-201ENST00000624177 1945 ntBASIC14.25□□□□□ -0.13
CD28P10747 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 AL020996.1-203ENST00000536896 2307 ntBASIC14.25□□□□□ -0.13
CD28P10747 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.25□□□□□ -0.13
CD28P10747 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.25□□□□□ -0.13
CD28P10747 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.25□□□□□ -0.13
CD28P10747 RN7SL606P-201ENST00000472779 293 ntBASIC14.25□□□□□ -0.13
CD28P10747 VENTXP7-201ENST00000475503 772 ntBASIC14.25□□□□□ -0.13
CD28P10747 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.25□□□□□ -0.13
CD28P10747 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.25□□□□□ -0.13
CD28P10747 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 AC004263.2-201ENST00000617183 678 ntBASIC14.25□□□□□ -0.13
CD28P10747 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.25□□□□□ -0.13
CD28P10747 AL031008.1-201ENST00000619963 541 ntBASIC14.25□□□□□ -0.13
CD28P10747 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms