Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC172P0C7W6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC172P0C7W6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC172P0C7W6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC172P0C7W6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 RBM17P1-201ENST00000453646 1190 ntBASIC19.75■□□□□ 0.75
CCDC172P0C7W6 BX088651.1-201ENST00000540551 451 ntBASIC19.75■□□□□ 0.75
CCDC172P0C7W6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 WWOX-216ENST00000569818 525 ntBASIC19.75■□□□□ 0.75
CCDC172P0C7W6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 AP006294.2-201ENST00000641667 209 ntBASIC19.75■□□□□ 0.75
CCDC172P0C7W6 AC116562.4-202ENST00000641738 218 ntBASIC19.75■□□□□ 0.75
CCDC172P0C7W6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC172P0C7W6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.74■□□□□ 0.75
CCDC172P0C7W6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 KRT18P23-201ENST00000435622 1283 ntBASIC19.74■□□□□ 0.75
CCDC172P0C7W6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 AP003041.3-201ENST00000527151 707 ntBASIC19.74■□□□□ 0.75
CCDC172P0C7W6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 MIR4674-201ENST00000582457 87 ntBASIC19.74■□□□□ 0.75
CCDC172P0C7W6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC172P0C7W6 KRT17P2-201ENST00000300992 1314 ntBASIC19.74■□□□□ 0.75
CCDC172P0C7W6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 FLJ13224-201ENST00000313737 1514 ntBASIC19.73■□□□□ 0.75
CCDC172P0C7W6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 FITM1-202ENST00000559294 800 ntBASIC19.73■□□□□ 0.75
CCDC172P0C7W6 C2orf69P3-201ENST00000565542 1120 ntBASIC19.73■□□□□ 0.75
CCDC172P0C7W6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 AC068880.1-201ENST00000507289 2297 ntBASIC19.73■□□□□ 0.75
CCDC172P0C7W6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC172P0C7W6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC172P0C7W6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms