Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.14■□□□□ 0.81
TPM1P09493 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.14■□□□□ 0.81
TPM1P09493 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TPM1P09493 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM1P09493 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM1P09493 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TPM1P09493 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM1P09493 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPM1P09493 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.14■□□□□ 0.81
TPM1P09493 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
TPM1P09493 AL109659.2-201ENST00000606809 1674 ntBASIC20.13■□□□□ 0.81
TPM1P09493 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 GMCL1P1-201ENST00000463439 1581 ntBASIC20.13■□□□□ 0.81
TPM1P09493 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TPM1P09493 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TPM1P09493 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TPM1P09493 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.13■□□□□ 0.81
TPM1P09493 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM1P09493 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.13■□□□□ 0.81
TPM1P09493 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.13■□□□□ 0.81
TPM1P09493 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.13■□□□□ 0.81
TPM1P09493 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
TPM1P09493 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.13■□□□□ 0.81
TPM1P09493 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 AC124067.4-201ENST00000519691 2379 ntBASIC20.13■□□□□ 0.81
TPM1P09493 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM1P09493 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM1P09493 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.13■□□□□ 0.81
TPM1P09493 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TPM1P09493 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TPM1P09493 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TPM1P09493 AC026366.1-201ENST00000488803 879 ntBASIC20.12■□□□□ 0.81
TPM1P09493 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.12■□□□□ 0.81
TPM1P09493 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
TPM1P09493 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.12■□□□□ 0.81
TPM1P09493 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.12■□□□□ 0.81
TPM1P09493 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TPM1P09493 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TPM1P09493 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM1P09493 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TPM1P09493 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM1P09493 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM1P09493 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM1P09493 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
TPM1P09493 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM1P09493 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TPM1P09493 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM1P09493 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.11■□□□□ 0.81
TPM1P09493 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TPM1P09493 KSR1P1-201ENST00000446298 240 ntBASIC20.11■□□□□ 0.81
TPM1P09493 CKBP1-201ENST00000565489 1086 ntBASIC20.11■□□□□ 0.81
TPM1P09493 AC104771.1-201ENST00000603335 964 ntBASIC20.11■□□□□ 0.81
TPM1P09493 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM1P09493 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TPM1P09493 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM1P09493 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM1P09493 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM1P09493 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM1P09493 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms