Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC117500.6-201ENST00000624871 588 ntBASIC18.87■□□□□ 0.61
RHOP08100 FAM215A-202ENST00000632077 792 ntBASIC18.87■□□□□ 0.61
RHOP08100 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RHOP08100 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RHOP08100 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.87■□□□□ 0.61
RHOP08100 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHOP08100 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.86■□□□□ 0.61
RHOP08100 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
RHOP08100 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.86■□□□□ 0.61
RHOP08100 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RHOP08100 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.86■□□□□ 0.61
RHOP08100 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.86■□□□□ 0.61
RHOP08100 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 KRT18P65-201ENST00000439811 1286 ntBASIC18.86■□□□□ 0.61
RHOP08100 SCARNA2-201ENST00000458748 420 ntBASIC18.86■□□□□ 0.61
RHOP08100 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.86■□□□□ 0.61
RHOP08100 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.86■□□□□ 0.61
RHOP08100 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.86■□□□□ 0.61
RHOP08100 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.86■□□□□ 0.61
RHOP08100 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.86■□□□□ 0.61
RHOP08100 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RHOP08100 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RHOP08100 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.86■□□□□ 0.61
RHOP08100 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RHOP08100 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RHOP08100 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.86■□□□□ 0.61
RHOP08100 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHOP08100 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RHOP08100 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RHOP08100 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.85■□□□□ 0.61
RHOP08100 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RHOP08100 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RHOP08100 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.85■□□□□ 0.61
RHOP08100 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RHOP08100 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.85■□□□□ 0.61
RHOP08100 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.85■□□□□ 0.61
RHOP08100 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
RHOP08100 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.85■□□□□ 0.61
RHOP08100 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.85■□□□□ 0.61
RHOP08100 HNRNPDP1-201ENST00000439535 754 ntBASIC18.85■□□□□ 0.61
RHOP08100 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.85■□□□□ 0.61
RHOP08100 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.85■□□□□ 0.61
RHOP08100 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.85■□□□□ 0.61
RHOP08100 AC139887.3-201ENST00000568585 713 ntBASIC18.85■□□□□ 0.61
RHOP08100 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.85■□□□□ 0.61
RHOP08100 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.85■□□□□ 0.61
RHOP08100 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.85■□□□□ 0.61
RHOP08100 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.85■□□□□ 0.61
RHOP08100 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.85■□□□□ 0.61
RHOP08100 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.85■□□□□ 0.61
RHOP08100 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RHOP08100 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RHOP08100 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RHOP08100 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RHOP08100 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RHOP08100 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RHOP08100 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RHOP08100 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.84■□□□□ 0.61
RHOP08100 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 AC005082.1-201ENST00000413042 2259 ntBASIC18.84■□□□□ 0.61
RHOP08100 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RHOP08100 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RHOP08100 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RHOP08100 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RHOP08100 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.84■□□□□ 0.61
RHOP08100 KRT18P58-201ENST00000527480 1120 ntBASIC18.84■□□□□ 0.61
RHOP08100 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 AC106730.1-201ENST00000566722 1090 ntBASIC18.84■□□□□ 0.61
RHOP08100 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.84■□□□□ 0.61
RHOP08100 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RHOP08100 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.84■□□□□ 0.61
RHOP08100 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.84■□□□□ 0.61
RHOP08100 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.84■□□□□ 0.61
RHOP08100 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.84■□□□□ 0.61
RHOP08100 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RHOP08100 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RHOP08100 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.84■□□□□ 0.61
RHOP08100 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RHOP08100 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms