Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.21■□□□□ 0.19
ERCC1P07992 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC1P07992 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC1P07992 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ERCC1P07992 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.21■□□□□ 0.19
ERCC1P07992 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ERCC1P07992 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ERCC1P07992 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ERCC1P07992 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ERCC1P07992 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ERCC1P07992 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC1P07992 AC112777.1-201ENST00000540175 1423 ntBASIC16.2■□□□□ 0.18
ERCC1P07992 AC092338.2-201ENST00000568827 1415 ntBASIC16.2■□□□□ 0.18
ERCC1P07992 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ERCC1P07992 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC1P07992 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC1P07992 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
ERCC1P07992 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.2■□□□□ 0.18
ERCC1P07992 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC1P07992 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
ERCC1P07992 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.2■□□□□ 0.18
ERCC1P07992 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC1P07992 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC1P07992 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ERCC1P07992 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC1P07992 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ERCC1P07992 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.2■□□□□ 0.18
ERCC1P07992 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC1P07992 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 AC068880.1-201ENST00000507289 2297 ntBASIC16.2■□□□□ 0.18
ERCC1P07992 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC1P07992 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
ERCC1P07992 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ERCC1P07992 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC1P07992 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 AC020916.1-201ENST00000587762 1774 ntBASIC16.19■□□□□ 0.18
ERCC1P07992 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ERCC1P07992 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC1P07992 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC1P07992 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC1P07992 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 AK4P3-201ENST00000418260 669 ntBASIC16.19■□□□□ 0.18
ERCC1P07992 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC1P07992 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC1P07992 AC092647.4-201ENST00000457211 535 ntBASIC16.19■□□□□ 0.18
ERCC1P07992 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 AC068587.9-201ENST00000641814 219 ntBASIC16.19■□□□□ 0.18
ERCC1P07992 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ERCC1P07992 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC1P07992 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC1P07992 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERCC1P07992 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC1P07992 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
ERCC1P07992 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ERCC1P07992 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 KRT8P11-201ENST00000409686 1436 ntBASIC16.19■□□□□ 0.18
ERCC1P07992 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERCC1P07992 AC073508.3-201ENST00000619697 1419 ntBASIC16.19■□□□□ 0.18
ERCC1P07992 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC1P07992 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ERCC1P07992 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.18■□□□□ 0.18
ERCC1P07992 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
ERCC1P07992 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ERCC1P07992 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.18■□□□□ 0.18
ERCC1P07992 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC1P07992 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms