Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR3DP05423 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR3DP05423 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR3DP05423 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
POLR3DP05423 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR3DP05423 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
POLR3DP05423 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR3DP05423 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR3DP05423 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POLR3DP05423 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR3DP05423 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR3DP05423 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR3DP05423 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR3DP05423 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
POLR3DP05423 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.78■■□□□ 1.08
POLR3DP05423 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR3DP05423 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.78■■□□□ 1.08
POLR3DP05423 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR3DP05423 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR3DP05423 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR3DP05423 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
POLR3DP05423 AC090616.6-201ENST00000582640 721 ntBASIC21.78■■□□□ 1.08
POLR3DP05423 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
POLR3DP05423 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
POLR3DP05423 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
POLR3DP05423 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.78■■□□□ 1.08
POLR3DP05423 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR3DP05423 KRT89P-201ENST00000620027 1478 ntBASIC21.77■■□□□ 1.08
POLR3DP05423 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR3DP05423 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
POLR3DP05423 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR3DP05423 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR3DP05423 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.77■■□□□ 1.08
POLR3DP05423 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR3DP05423 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR3DP05423 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.77■■□□□ 1.08
POLR3DP05423 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR3DP05423 AL450487.1-201ENST00000426799 995 ntBASIC21.77■■□□□ 1.08
POLR3DP05423 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR3DP05423 LINC00265-3P-201ENST00000447588 903 ntBASIC21.77■■□□□ 1.08
POLR3DP05423 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR3DP05423 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POLR3DP05423 TPSP2-201ENST00000561760 610 ntBASIC21.77■■□□□ 1.08
POLR3DP05423 PRELID1P1-202ENST00000567272 903 ntBASIC21.77■■□□□ 1.08
POLR3DP05423 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POLR3DP05423 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR3DP05423 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.77■■□□□ 1.07
POLR3DP05423 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
POLR3DP05423 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 AL353692.3-201ENST00000407031 1396 ntBASIC21.76■■□□□ 1.07
POLR3DP05423 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 DRAXINP1-201ENST00000437611 948 ntBASIC21.76■■□□□ 1.07
POLR3DP05423 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.76■■□□□ 1.07
POLR3DP05423 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.76■■□□□ 1.07
POLR3DP05423 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.76■■□□□ 1.07
POLR3DP05423 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.76■■□□□ 1.07
POLR3DP05423 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.76■■□□□ 1.07
POLR3DP05423 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.76■■□□□ 1.07
POLR3DP05423 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms