Protein–RNA interactions for Protein: P04843

RPN1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1, humanhuman

Known RBP Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1P04843 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPN1P04843 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.33■□□□□ 0.84
RPN1P04843 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.33■□□□□ 0.84
RPN1P04843 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RPN1P04843 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPN1P04843 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.32■□□□□ 0.84
RPN1P04843 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.32■□□□□ 0.84
RPN1P04843 AC073912.3-201ENST00000624414 853 ntBASIC20.32■□□□□ 0.84
RPN1P04843 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPN1P04843 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.32■□□□□ 0.84
RPN1P04843 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.32■□□□□ 0.84
RPN1P04843 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.32■□□□□ 0.84
RPN1P04843 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.32■□□□□ 0.84
RPN1P04843 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPN1P04843 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.31■□□□□ 0.84
RPN1P04843 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.31■□□□□ 0.84
RPN1P04843 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.31■□□□□ 0.84
RPN1P04843 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.31■□□□□ 0.84
RPN1P04843 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.31■□□□□ 0.84
RPN1P04843 AL512604.3-201ENST00000569583 964 ntBASIC20.31■□□□□ 0.84
RPN1P04843 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RPN1P04843 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.31■□□□□ 0.84
RPN1P04843 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.31■□□□□ 0.84
RPN1P04843 LINC01568-207ENST00000641790 1380 ntBASIC20.31■□□□□ 0.84
RPN1P04843 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPN1P04843 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.3■□□□□ 0.84
RPN1P04843 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.3■□□□□ 0.84
RPN1P04843 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
RPN1P04843 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RPN1P04843 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RPN1P04843 AC087499.1-201ENST00000418141 1075 ntBASIC20.3■□□□□ 0.84
RPN1P04843 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.3■□□□□ 0.84
RPN1P04843 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.3■□□□□ 0.84
RPN1P04843 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.3■□□□□ 0.84
RPN1P04843 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.3■□□□□ 0.84
RPN1P04843 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.3■□□□□ 0.84
RPN1P04843 NEK4P2-201ENST00000580004 1012 ntBASIC20.3■□□□□ 0.84
RPN1P04843 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
RPN1P04843 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.3■□□□□ 0.84
RPN1P04843 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPN1P04843 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RPN1P04843 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPN1P04843 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPN1P04843 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPN1P04843 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPN1P04843 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPN1P04843 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms