Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC108073.2-201ENST00000464002 357 ntBASIC11.33□□□□□ -0.6
APOBP04114 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC11.33□□□□□ -0.6
APOBP04114 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC11.33□□□□□ -0.6
APOBP04114 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 AC007274.1-201ENST00000439805 662 ntBASIC11.33□□□□□ -0.6
APOBP04114 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.33□□□□□ -0.6
APOBP04114 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 AC005829.1-201ENST00000570002 483 ntBASIC11.33□□□□□ -0.6
APOBP04114 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.33□□□□□ -0.6
APOBP04114 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
APOBP04114 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC11.33□□□□□ -0.6
APOBP04114 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.33□□□□□ -0.6
APOBP04114 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.33□□□□□ -0.6
APOBP04114 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC11.33□□□□□ -0.6
APOBP04114 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
APOBP04114 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 ELK2BP-201ENST00000415014 1224 ntBASIC11.32□□□□□ -0.6
APOBP04114 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.32□□□□□ -0.6
APOBP04114 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.32□□□□□ -0.6
APOBP04114 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.32□□□□□ -0.6
APOBP04114 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.32□□□□□ -0.6
APOBP04114 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
APOBP04114 AL035252.4-201ENST00000624174 288 ntBASIC11.32□□□□□ -0.6
APOBP04114 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC11.32□□□□□ -0.6
APOBP04114 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 AC009102.3-201ENST00000623118 1491 ntBASIC11.32□□□□□ -0.6
APOBP04114 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
APOBP04114 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.32□□□□□ -0.6
APOBP04114 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
APOBP04114 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.32□□□□□ -0.6
APOBP04114 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 PAWRP1-201ENST00000451083 565 ntBASIC11.32□□□□□ -0.6
APOBP04114 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
APOBP04114 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC11.32□□□□□ -0.6
APOBP04114 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
APOBP04114 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.31□□□□□ -0.6
APOBP04114 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.31□□□□□ -0.6
APOBP04114 FEM1AP3-201ENST00000403722 1741 ntBASIC11.31□□□□□ -0.6
APOBP04114 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC11.31□□□□□ -0.6
APOBP04114 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC11.31□□□□□ -0.6
APOBP04114 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.31□□□□□ -0.6
APOBP04114 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.31□□□□□ -0.6
APOBP04114 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.31□□□□□ -0.6
APOBP04114 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.31□□□□□ -0.6
APOBP04114 MIR4745-201ENST00000577608 62 ntBASIC11.31□□□□□ -0.6
APOBP04114 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC11.31□□□□□ -0.6
APOBP04114 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 AL158211.5-201ENST00000623583 2518 ntBASIC11.31□□□□□ -0.6
APOBP04114 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
APOBP04114 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
APOBP04114 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms