Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VTNP04004 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VTNP04004 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.95■□□□□ 0.78
VTNP04004 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VTNP04004 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.95■□□□□ 0.78
VTNP04004 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.95■□□□□ 0.78
VTNP04004 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.95■□□□□ 0.78
VTNP04004 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.95■□□□□ 0.78
VTNP04004 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.95■□□□□ 0.78
VTNP04004 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.95■□□□□ 0.78
VTNP04004 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.95■□□□□ 0.78
VTNP04004 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.95■□□□□ 0.78
VTNP04004 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.95■□□□□ 0.78
VTNP04004 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.95■□□□□ 0.78
VTNP04004 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VTNP04004 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VTNP04004 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VTNP04004 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.94■□□□□ 0.78
VTNP04004 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.94■□□□□ 0.78
VTNP04004 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.94■□□□□ 0.78
VTNP04004 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
VTNP04004 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VTNP04004 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.94■□□□□ 0.78
VTNP04004 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VTNP04004 AC009154.2-201ENST00000621177 724 ntBASIC19.94■□□□□ 0.78
VTNP04004 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.94■□□□□ 0.78
VTNP04004 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTNP04004 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
VTNP04004 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 GMCL1P1-201ENST00000463439 1581 ntBASIC19.93■□□□□ 0.78
VTNP04004 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.93■□□□□ 0.78
VTNP04004 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 MTCL1P1-201ENST00000446207 792 ntBASIC19.93■□□□□ 0.78
VTNP04004 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.93■□□□□ 0.78
VTNP04004 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.93■□□□□ 0.78
VTNP04004 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VTNP04004 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTNP04004 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.93■□□□□ 0.78
VTNP04004 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
VTNP04004 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 ESPNP-201ENST00000270691 2015 ntBASIC19.92■□□□□ 0.78
VTNP04004 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.92■□□□□ 0.78
VTNP04004 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 POM121L3P-201ENST00000419331 1163 ntBASIC19.92■□□□□ 0.78
VTNP04004 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.92■□□□□ 0.78
VTNP04004 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.92■□□□□ 0.78
VTNP04004 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.92■□□□□ 0.78
VTNP04004 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTNP04004 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms